Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4579g00059 ATGGTGAGAGCCCCTAATTGTGACAAAAGTGGACTGAGGAAAGGCGCGTGGACACCTGAGGAAGACAGGAAGTTGATTGCTTATGTTACTAGGTATGGCCACTGGAATTGGAGGCAACTTCCCAAGTTCGCAGGTCTTGCAAGGTGTGGGAAGAGTTGCAGGTTGAGGTGGATGAACTATCTAAGGCCCCACATCAAAAGAGGGGACTATAGTCAAGAAGAAGATGAAACTATTATCAGACTTCATGAGAAGCTGGGCAATAGATGGTCCGTGATTGCATCTCATTTGCCAGGGAGAACGGATAACGAGATAAAGAATCACTGGCACACAACCCTGAAGAAGCGTTTTGAACCCAAGTCAACCAAAGTCTCTAACTCAAAGAATCACTCCCCAATGGAAGACAAGCAACTACAGAGAGAGTCAGAGAACAGTGGTGGTTCCGATACCTGTCCATATTCTCCAAAGCCATCGTCTAGCGAATTCTCCTGCATAACAGGAGATACTGTAGCTGACAAAAATCACGAAAATCTTATTCTAGAAGATGACCTTTCTTTTCTGGATGCATATATAGAGCCCGTGAGTGCAAATTTCTGGACAGAGCCGTATATGACTGACATTTCCTATGTCCCTCCTACCGAAGCAGCTGCGCCCTTGGGTTGTGAACTTGAATACTTTAGTTCTATGTGCGATGTAGAATTTTGGAGCCAGAATAGTTTGTATCACGAGGGCTTATTCTATTGA 741 0.448 MVRAPNCDKSGLRKGAWTPEEDRKLIAYVTRYGHWNWRQLPKFAGLARCGKSCRLRWMNYLRPHIKRGDYSQEEDETIIRLHEKLGNRWSVIASHLPGRTDNEIKNHWHTTLKKRFEPKSTKVSNSKNHSPMEDKQLQRESENSGGSDTCPYSPKPSSSEFSCITGDTVADKNHENLILEDDLSFLDAYIEPVSANFWTEPYMTDISYVPPTEAAAPLGCELEYFSSMCDVEFWSQNSLYHEGLFY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4579g00059 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 159 - -
Gabi4579g00059 246 MobiDBLite consensus disorder prediction 142 156 - -
Gabi4579g00059 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi4579g00059 246 CDD SANT 16 61 IPR001005 -
Gabi4579g00059 246 CDD SANT 70 112 IPR001005 -
Gabi4579g00059 246 Gene3D - 6 66 - -
Gabi4579g00059 246 SMART sant 13 63 IPR001005 -
Gabi4579g00059 246 SMART sant 66 114 IPR001005 -
Gabi4579g00059 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gabi4579g00059 246 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gabi4579g00059 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi4579g00059 246 Gene3D - 68 144 - -
Gabi4579g00059 246 MobiDBLite consensus disorder prediction 115 156 - -
Gabi4579g00059 246 FunFam MYB-related transcription factor 13 66 - -
Gabi4579g00059 246 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gabi4579g00059 246 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi4579g00059 246 MobiDBLite consensus disorder prediction 115 141 - -
Gabi4579g00059 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4579g00059 Gabi-Chr4579 850473 851977 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4579g00059 1 207 MYB Transcription Factor Family AT2G31180 47.596 3.48e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi4579g00059 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4579g00059 K09422 - gmx:100815765 280.411