Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4579g00052 ATGGTAGAGCCTAGAGCAAATAAGGTTGTTGAGCAAACACAGATTTGTCCAACAGCACCCTCTGATCGTAGAAGAAGCAGAACCTTATCTCTTCCCCTCACATTTCTTGACTTGCCTTTGGCAGGTCCAATTTATGTTAGACGCCAATTTTTCTATCATTTTCCTCACACCACTCACCATTTCTCCGAAACAACACTCCCTACTCTCAAACGTTCTCTCTCTCTCACCCTTCAACATTTCTTCCCTCTCGCTGGAAATCTCCTCTGTCCACCACCACCCAACAAGCCCTTCATTCTCTGCAATGATGATGACTCTGTCACCTTAACCATCATCGAGTCTTCAGGGGATTTCAAGCATCTCTCAGCCAACCACCCCAAGAGTCTCAAAGACTTGGATCACCTTGTTCCAAAGTTGACTTTCACAACCATGCATGATGACACTTTCATCTTCCCATTATTGGCTTTGCAAGCCTCGGTTTTCCCCAACCATGGCATCTGCATCGCCATCACGTATTGCCACGTGATGGATGATAGTTGTTGCAGTCATTTCATGAAGTCTTGGTCTTCCATTTGTCGAACCAATGGAGTTGACCTCACATTTCTTGAGAATTCACCACCGTGCTTTGATAGGGAAGTGTTGAAAGACCCCAATGGACTCGAGGCCATTTTCTTAAGAGATTACTTTGAAGCAAGATCAACTTGGAAGGACAAACTCATTGGTCAAAGTGGTGGTGATGAGGACTATGTTAAAGCAACGATTGTGTTTGGTAGAGAAGACATCGAGGGGATGAAAAGATGGGTACTCAATCATTGGAAGAAGAGCGATAAATTCAACACGCCGCAATATCTATCAAAATTTGTCGTGACGTGTGCTTTTGTGTGGTCTAGCTTGGTTAAAACAAGATATAGAGATGATGATGAAAATGAAGAGATCAAAGAGGAGTACTTTCGTTTTGCAGCAGATTGTAGAGATCGCCTTGAGTACCTTATACCCGAGACTTACTTTGGGAACTGCTTAACGTTGTGTCATGCAACGCTTAAGAGAAAGGACCTCAAGGGAGAAGATGGTTTTGTGAATGCTGTTAAGGTCATTGAAAGGGAAGTAACTGATATGAAAAATGAACCCTTTAAAGATGCAGAAAACTGGAGGGCATCTTTTACAAAGATGTTTGTGTTGGGAAGTACGTTGCTAGTTACAGGGTCACCGAAGTTTACTGTTTATGAGACTGACTTTGGATTTGGAAGACCTACTAAAGTGGAGATGGTTCATTCATTCAAGGGTATGTCTCTTGCTGAAAGTGGAGACAAAGAAGGAGGACTTGAGGTTGGCTTGGTATTTAGGACCACGGAATTTGAATATTTCAATTCTATCATTGAACAAGGACTCGAAGCTTTAAGATCCTAA 1404 0.4252 MVEPRANKVVEQTQICPTAPSDRRRSRTLSLPLTFLDLPLAGPIYVRRQFFYHFPHTTHHFSETTLPTLKRSLSLTLQHFFPLAGNLLCPPPPNKPFILCNDDDSVTLTIIESSGDFKHLSANHPKSLKDLDHLVPKLTFTTMHDDTFIFPLLALQASVFPNHGICIAITYCHVMDDSCCSHFMKSWSSICRTNGVDLTFLENSPPCFDREVLKDPNGLEAIFLRDYFEARSTWKDKLIGQSGGDEDYVKATIVFGREDIEGMKRWVLNHWKKSDKFNTPQYLSKFVVTCAFVWSSLVKTRYRDDDENEEIKEEYFRFAADCRDRLEYLIPETYFGNCLTLCHATLKRKDLKGEDGFVNAVKVIEREVTDMKNEPFKDAENWRASFTKMFVLGSTLLVTGSPKFTVYETDFGFGRPTKVEMVHSFKGMSLAESGDKEGGLEVGLVFRTTEFEYFNSIIEQGLEALRS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4579g00052 467 Gene3D - 6 239 IPR023213 -
Gabi4579g00052 467 Gene3D - 245 465 IPR023213 -
Gabi4579g00052 467 Pfam Transferase family 12 456 - -
Gabi4579g00052 467 PANTHER - 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4579g00052 Gabi-Chr4579 699689 701269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4579g00052 68 458 Monolignol Biosynthesis Gene Families AT5G48930 23.039 2.13e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4579g00052 - - aprc:113855905 739.569