Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4579g00051 ATGGCTCATGAGGTCAATCATCACTCCCTAACAGTCATAGAGCGGTGTCAACTGTCTCCCCCACCAGGCTCACTTCCTTCAACAACTCTTCCTCTCACTTTCTTTGATCTTCCCTGGTTTTACTGCCACCCCGTTCAACGCATCTTCTTCTATGAGTTTCCATATCCAACCCATCACTTCCTCCAAACAGCACTTCCCACTCTCAAACACTCACTTTCCCTCACTCTCAAACACTTCTTCCCCTTCGCCTCCAATCTCATCGTCCCTCCGCACCCACACGTGCCTTACATCCGCTACCAAGACGGTGACTCTCTCTCCTTCTCCGTCGCAGAGTCAACCGCAGACTTCACCCTCCTCGTATCTGATTCCCCACAAGACGTTCGAGATTGGCACCCCTTGGTTCCCACGTTGCCTTCACCACTAACTGAGGAGGATGGCACACGTGTGATCCCTCTCATGGTTATTCAGGTTACTGTTCTATCCAACTCTGGATTCAGCATCTGCCTTACGTACAACCACCTTGCTGGGGATGGAAAATCACTTCACCTTTTCATGAAGTATTGGGCTTCTGTTTGCAAGGCAAGAGGGGATTTGGCTTCTCTTGAAGGTTATTCCTTGTCTCTTCCTTCCCATGAGAGGGAGAGACTCAAAGACCCAAAGGGGCTTAAGCACATTTACTTAAGAGAACTACAACATTCGGAGTCGGAAAGCATGGAATTTGCAGGCCTCGTGCGAGATGTTTATACTAACAAGTTACGCGCCACTCTTGTATTGAGTCGTGAACATGTTGAGAAACTAAAGAAATGGGTATCTCTTAAATTGACAACAAGTTACGCTTCAGGGACATTGCATATATCAACCTTTGTTGTAACATGCTCCTTGGTTTGGGTTTCTATGATCAAATCAGAACAGATCAAAGGGAATATTTTTGTTGCAAAAGACCAACACTGCTACTTGATCTTTCTAGGAGATTGTCGAGATCGTCCTGAACTTTCTTTACCTTCAATGTTCTTTGGTAATTGTCTGGCCACTTGCATTGTGGCAATGAAGAGGAGTGAGCTAGTGGGAGAAAATGGGATCATTGATGTAGCAAAAGCTATTGAAAGGGGAGTTAGAGATTTGAAGAGTGATCCTTTGAGAAATGCTGACACATTGATGTCAGATTACAGAGGATTAGGGAAAAAAGGTCATTCAGTTCTTGTAATTGCAGGCTCACCAAAACTGGCAGTGTACGAGACTGATTTTGGGTGGGGAAAGCCTAAAAAGTCTGAAGCAGTGCACATTGATTCATCAGGATCAGTCTCTCTCTCTGATTGCAGAGACAAAGAAGGTGGAATTGAGGTTGGAATGGCACTTGAAAGGATTCGAATGAATAATTTTACCAACATCTTAGATGAACAGCTTAATAACATTATAGTTTGTGAATGA 1428 0.4447 MAHEVNHHSLTVIERCQLSPPPGSLPSTTLPLTFFDLPWFYCHPVQRIFFYEFPYPTHHFLQTALPTLKHSLSLTLKHFFPFASNLIVPPHPHVPYIRYQDGDSLSFSVAESTADFTLLVSDSPQDVRDWHPLVPTLPSPLTEEDGTRVIPLMVIQVTVLSNSGFSICLTYNHLAGDGKSLHLFMKYWASVCKARGDLASLEGYSLSLPSHERERLKDPKGLKHIYLRELQHSESESMEFAGLVRDVYTNKLRATLVLSREHVEKLKKWVSLKLTTSYASGTLHISTFVVTCSLVWVSMIKSEQIKGNIFVAKDQHCYLIFLGDCRDRPELSLPSMFFGNCLATCIVAMKRSELVGENGIIDVAKAIERGVRDLKSDPLRNADTLMSDYRGLGKKGHSVLVIAGSPKLAVYETDFGWGKPKKSEAVHIDSSGSVSLSDCRDKEGGIEVGMALERIRMNNFTNILDEQLNNIIVCE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4579g00051 475 Gene3D - 10 241 IPR023213 -
Gabi4579g00051 475 PANTHER - 10 470 - -
Gabi4579g00051 475 Pfam Transferase family 22 461 - -
Gabi4579g00051 475 Gene3D - 248 471 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4579g00051 Gabi-Chr4579 683477 684904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4579g00051 48 466 Monolignol Biosynthesis Gene Families AT5G48930 22.685 1.36e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4579g00051 - - gmx:100797294 680.633