Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4574g00007 ATGGTGATCTTAAACCTTGGGAGGAAGAAGGAGAGTCAAGGAAATCGACTTGGGAAATATGTATTGGGTAGGACTCTTGGGGAAGGTAATTTTGGAAAAGTCAAGTTGGCTAGGAACACAGATTCTGGACAACTTTTTGCTATTAAGATCCTTGACAAAAACAAAGTCATTGATCTCAATAACGCTGATCAGATAAAGAGGGAAATATCCACCTTGAAGCTCCTCAAGCATCCGAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAATCCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGATAAAATTTCATCCAAAGGTAAACTTTCAGAAGCTGATGGCAGGAAGTTGTTCCAACAGTTGATTGATGGTGTGAGCTACTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTAGAGAATGTACTACTGGATACCAAAGGGAACATAAAAATAACCGATTTTAACCTTAGTGCTTTGCCTCAGCATATTAAGGCAGATGGGTTGCTACATACAACATGTGGAAGTCCCAACTATATTGCACCTGAAATTCTTGCTAATAGAGGCTATGATGGTGCAAAATCAGATGTATGGTCATGTGGTGTTCTCTTGTATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAACCTTGCAGTTCTCTATCAAAAGATATTGAAAGGAGATTGTCAGATACCAAAATGGCTATCACCTGGTGCTCAGAACATTATAAAGAGGATTCTTGATCCCAATCCTAAAACCAGGATATCAATGGCTATGATCAAAGAAAATGAATGGTTCAAGGAGGGTTATACTCCTGCAAATCCAGATGATGAGGAAGAGGATGCATATATTGATGATGAAGCCTTTTCCATCCAGGAAGTGCCACTTGAATCACAAGGAGGGAGTCCTGGATCACCAACACTTATCAACGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCGGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCAAACCATTCACCAAAAGATTTGATTGAGAGGATTGAGGACATTGTAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAGTTGAAAGTGATACAGGAGAACAAAGCACAGAAAAGTCTAGGTAGCCTCTCAGTGGCAGCAGAGGTTTTTGAAATAAGCCCATCCTTGCGTGTAGTAGAATTAAGGAAGTCTTACGGAGATGCTTCTGTATATAGACAGTTATGCAAGAAGTTATCAAATGATTTGGGTGATCACCAAACGCAGCAGTTAGTGAACTCAGAAGATATAGGCCTGTTAGAAAAGAATTTAGAAGCCAGTTAA 1374 0.3952 MVILNLGRKKESQGNRLGKYVLGRTLGEGNFGKVKLARNTDSGQLFAIKILDKNKVIDLNNADQIKREISTLKLLKHPNVVRLYEVLASKSKIYMVLEYVNGGELFDKISSKGKLSEADGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLLDTKGNIKITDFNLSALPQHIKADGLLHTTCGSPNYIAPEILANRGYDGAKSDVWSCGVLLYVILTGYLPFDDRNLAVLYQKILKGDCQIPKWLSPGAQNIIKRILDPNPKTRISMAMIKENEWFKEGYTPANPDDEEEDAYIDDEAFSIQEVPLESQGGSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLIERIEDIVTEMGFRVQKKNGKLKVIQENKAQKSLGSLSVAAEVFEISPSLRVVELRKSYGDASVYRQLCKKLSNDLGDHQTQQLVNSEDIGLLEKNLEAS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4574g00007 457 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gabi4574g00007 457 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Gabi4574g00007 457 Gene3D Kinase associated domain 1, KA1 313 436 - -
Gabi4574g00007 457 FunFam Non-specific serine/threonine protein kinase 13 313 - -
Gabi4574g00007 457 CDD CIPK_C 319 435 - -
Gabi4574g00007 457 Pfam NAF domain 315 374 IPR004041 GO:0007165
Gabi4574g00007 457 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4574g00007 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 422 - -
Gabi4574g00007 457 Gene3D Transferase(Phosphotransferase) domain 1 10 310 - -
Gabi4574g00007 457 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4574g00007 457 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4574g00007 457 SUPERFAMILY Protein kinase-like (PK-like) 17 296 IPR011009 -
Gabi4574g00007 457 FunFam Non-specific serine/threonine protein kinase 315 437 - -
Gabi4574g00007 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Gabi4574g00007 457 FunFam Non-specific serine/threonine protein kinase 11 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4574g00007 Gabi-Chr4574 35629 40271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4574g00007 83 440 CBL-interacting serine-threonine protein kinases AT3G17510 71.309 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi4574g00007 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4574g00007 K07198 - gmx:100815660 736.102