Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00107 ATGACCATGTCAATGTTAATGTGCAGACTAAGACAACCCCTAATAAATGTTCCTTGCAGTGGCCAAAAATTGAATGGGAGGCAGATTCAAAAAGAGAAGGTAGTGTTGGTGATGGGAGCCACAGGGACAGGGAAGTCAAGGCTCTCCATAGACATAGCAACATGTTTTCCATCAGAAATCATCAACTCTGACAAAATTCAAGTCTATGAAGGGCTTGACATAATCACAAACAAAATCTCCAAGGAAGAACAACGTGGGGTACCCCACCATTTACTAGGAAACCACAACCCCAACACAGAGTTCACAGCCAATGATTTCTGTGACATGTCATTAGTAACCATTGACTCAATCACTGGCCGTGAACAGCTTCCAATCATTGTTGGAGGCTCCAACTCCTACCTTGAGGCCTTAATTGACGACGATGATTACAAGTTCCGATCAAGGTACGATTTTTGTTGCCTCTGGGTGGACGTGTCAATGCCTGTTCTTCATTCCTATGTAGGAGAACGTGTTGATCAAATGTTTGAGAATGGAATGGTGAATGAACTGAGACCCTTTTTCAATCCCAACGGGGATTACTCACGAGGGATTAGAAAAGCCATTGGTGTTCCCGAATTTGATGAGTATTTTAGGAAAGAAGCATTTGCAGATGAGGGGAAAAAAAAGATGTTACTGGAAGAAGCAATGAATGAAATGAAGTTGAATACTTGGAAGCTTGCTAGGAAACAGTTGGGGAAGATTCATAGGCTGAGGAATGTGAAGAGATGGGAGATTCATCGCTTGGATGCAACACCTGTGTTCCGAAAGCATGGTGTTGAAGAAGCAAATGAAGCGTGGAAGAAGCTAGTGGCAGAGCCTAGTGCTATGATCGTGGCTCACTTTCTCTATAACAAAACCACTGCTAATGTTGTTTCTGTTTCTGACCTTAGAGTGCCATCTTCCGACACCGTTATGACTGCGGCAACATGCTAA 972 0.4321 MTMSMLMCRLRQPLINVPCSGQKLNGRQIQKEKVVLVMGATGTGKSRLSIDIATCFPSEIINSDKIQVYEGLDIITNKISKEEQRGVPHHLLGNHNPNTEFTANDFCDMSLVTIDSITGREQLPIIVGGSNSYLEALIDDDDYKFRSRYDFCCLWVDVSMPVLHSYVGERVDQMFENGMVNELRPFFNPNGDYSRGIRKAIGVPEFDEYFRKEAFADEGKKKMLLEEAMNEMKLNTWKLARKQLGKIHRLRNVKRWEIHRLDATPVFRKHGVEEANEAWKKLVAEPSAMIVAHFLYNKTTANVVSVSDLRVPSSDTVMTAATC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00107 323 Gene3D - 31 295 IPR027417 -
Gabi4573g00107 323 FunFam Adenylate isopentenyltransferase 5, chloroplastic 160 258 - -
Gabi4573g00107 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Gabi4573g00107 323 Pfam IPP transferase 67 140 - -
Gabi4573g00107 323 Pfam IPP transferase 145 244 - -
Gabi4573g00107 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 294 IPR039657 -
Gabi4573g00107 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 141 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00107 Gabi-Chr4573 903409 904545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00107 147 301 C2H2 Transcription Factor Family AT2G27760 31.868 1.24e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00107 K10760 - gmx:100803964 487.263