Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00071 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATATCTTGGGAGAAGATGAATACAGAGCTTATATGGGGGGAATTGTGGCTCAGCTACAAGATCACTTTCCAGATGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGAGAGACGCAGCCAAATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATACGAGGGTTGTCCCCTTCTGCCTTTAGAGATGGTCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCTGTGCTGGCATTTATGCTAGCAGGTCTTCTATTATACCGGAAACAGTACAATGGGGATCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAACTTCTCCACTTTTTATCTCCTTTGAACCCACAGCCTTCTCAGTTCAGATATCTTCAGTATATTTCTAGGAGACATTTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTGTATTTGGATCGTCTGATTCTTAGCGACCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAAGCCCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACTTCAAAATCCAAAAGGCATGTTCATCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAGATGAAGATTATATTCGTGAGGAGATGATGTTTAGAGTTATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTATTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAAAGTGCTGACACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGGGGGAGTATGATTCTCATGCTTTTCATGACAATGCAGTGGATGATGCAAATCATAAAGAGATTTGGAAGGAAGAAGTGGATCCTCATACTTTTCAGGATTGTACACCAGATGATGGGATCCACAAACAGGTTGACAAGATGGATTCTGGTATTAATGTGGTGAAAGACATCTCTGTTGATGATGTGAACTACAAGTTCAATAAGAGCATGGATTCAGATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTTAACTTCCCCTTCAGTCACTTCCGATGTGATGAAAACTCTGGAACCAAAGGAAGTCACTGTGGATGTGCACAGGGATTTGGAAGTTATGCAAAACAAATATGATGAAGATAACGAAGCAACAAAAAATGAATTAGACTCCAAGGCAGGGCAGCAGATGCCTGATATTTCCAAACAAAAATCTGGTAAACTACTTCCATCTACTGCCAAGAAACAGCTTCCATTAAACTCAAAGCCAGTCGGAGATATACTTGCAGCAAAGCAAAAGGTTAAACAACAAGACACTCAAGGTTTTCAGACAAAACAAGCCAAACCGAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTACATAAATTCAATGCATGTGTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCATTGTCAAATTTTACCTCTCCAAAGGAGAAAATGGAAGATGCCAAAGCAAGATCTTCTTCTGCTCCTCTTGTCTCTGCAATTGTTTCTATTGACATGACAAATGACCAGAAAAGCCGTAAGTTAACCACTTCAAAATCTTCTGGCTACTCAATAGCAGAAATAGATGCAAACTGTCCACCATCACCGTTAGTGTCAATTAAAGAGACATCTCTTCAATCAGTTACTCAAGCACAACAATTGAGCTCAGAGCAAGTGCTACGGCCTCCCCCACCGCCTCCACCTTTGCCTCCAACTCATGCAAGAAACTCTTTACATGTTTTTGAACCTTTATCATTACAGAATGTTGTATCACCTCAAGCTCATCCATCTCTACTAGTAACATCATCTTCTTTGGGTGGAAAAGAGTCTATTGCACAACCGTTAACACATCCGCCACCACCGCCAACTTTAACATCATTTACTAGACCAGAAGTTAGAGAGTATTTACTATCTAGAATTTCTCCTCCCCTTCCCCCTCCCCCTCCCCCTCCCCCTCCGCCCCCATTTTTTGGGCAAAATAAAAAGAGCTTATTACCTTCTCTACCCCTTTTGAAGTCGGTGGGTTCATCAATAGTTGGAGATACTAGTGGTTCTTTATCACCTTCTCTACCCACTCTTCCTTCATGGTCTCCACCTCCACCACCACCACCACCACCACCACCACCACCAATGCCTCCTCTAAGGTATGCAGTTTCATCCACTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCACCGCCACCGCCATCAACAACACCTCCTCCCCCTCCCTCATTTCCTACATCTTTGACACATAAGGCTCCAAACCCTTCGCTCCCACTACCCTCCACTGCATCACATGAAGCTCCATTGGCACCCCCACCTCCACCTCCACCTCCACCTTCTTTTAGTAGAGCTCAACCACTGCCTCCTCCACCTCCTTTTAGTAGAGCTCCGCCTCCATTGCATGGAGCTCCACCTACACCTTCCCGACCACCACTTCTTCCTTCATCAGGTGTTGCCCCACCTCCACCTCCTCCTCCTCCTCCAACGTCTAGAGCCCCACCTCCCCCACCCCCACCAATTCGTGGAGCACCACCACCACCTCCTCCAATGCCTAGAGCACCGCCTCCTCCGCCTCCACCTGGTGGACGAGGCCCACCCCCTCCGCCTCCGCCTGGTGGTCGAGGCCCAGCTCCTCCACCTCCCCCTAGTGCTCCTGGTGCTCCACCTCCTCCTAGACCTCCTGGTGGTGCACCTCCGCCGCCTCCACCTTTAGGTTCCAAAGGTGCAAATCTTGTAGCTGATTCGAGAGGGAGAGGGCGTGGATATGCACGCTCTGCAGGAGTTGGTGCAACGGCATCCCGACGATCCTCCTTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAGCCTCAAATTGCACCAGAGTTTGATGTTTTAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCCGTTGATTCTGGAGGGCGGCGCAAGTCCGTTGGATCTAAAACTGACAAAGTCCACTTGATTGACCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTATTGGCCATGGATGAGTCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAGATGGAACTTTTGAAGGGGTACACGGGTGACAAGGAGAATTTGGGGAAGTGTGAACAGTATTTTTTGGAGCTCATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCTCTTTCAAGATTCAGTTTGGTTCTCAGGTTACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAGGAGGTCCGAAAATCTGTCAAACTGAAGGAGATCTTGAAGAAAATTCTTTATTTGGGTAATACGTTGAATCAGGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGCGCTTCTAACAATAAGATGACACTGATGCATTATCTATGCAAGGTTATAGCTGAAAAGTCAACTGGACTCCTTGATTTTCACCTAGACCTTGTTAGCCTGGAAGCTGCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAGTTCACTGTATCTGAAAATGATGGACCCGTGTCAGAAGTTTTCCGTAAGACATTGAAGGAATTCATAATTGTGGCTGAGTCAGAGGTGGTATCTTTAACAAGCCTATATTCAGTGGTGGGTAGAAATGCAGATGCACTTGCACTATACTTTGGTGAGGATCCTGCTCGTTGCCCGTTTGAGCAGGTTACTGCAACTCTCTTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAACTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGGAATAGAAAAGGCCAAGGGCATTAACTTGACAAGGAAGAGTGCAAAAGATAGTTGA 4449 0.4507 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDILGEDEYRAYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDILSQYDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGDQKTLEMVYKQAPRELLHFLSPLNPQPSQFRYLQYISRRHLGSEWPPSETPLYLDRLILSDLPLFDDGKGCRPVVRVYGQDPSSPANRSSKLLFSTSKSKRHVHHYLQAECMLVKIDIHCRVQGDVVLECIHLDEDYIREEMMFRVMFHTAFVRSNILMLSRDEIDILWDAKDQFPKDFKAEVLFLDADAIIPDLTTVTVSEDANETESADTESASPEEFYEVEEIFSNVIDAQEGKGEYDSHAFHDNAVDDANHKEIWKEEVDPHTFQDCTPDDGIHKQVDKMDSGINVVKDISVDDVNYKFNKSMDSDAVKDIAVDDGEIKLTSPSVTSDVMKTLEPKEVTVDVHRDLEVMQNKYDEDNEATKNELDSKAGQQMPDISKQKSGKLLPSTAKKQLPLNSKPVGDILAAKQKVKQQDTQGFQTKQAKPNAVTRWIPSNKGSYINSMHVYYPPSRNNSAPAALSNFTSPKEKMEDAKARSSSAPLVSAIVSIDMTNDQKSRKLTTSKSSGYSIAEIDANCPPSPLVSIKETSLQSVTQAQQLSSEQVLRPPPPPPPLPPTHARNSLHVFEPLSLQNVVSPQAHPSLLVTSSSLGGKESIAQPLTHPPPPPTLTSFTRPEVREYLLSRISPPLPPPPPPPPPPPFFGQNKKSLLPSLPLLKSVGSSIVGDTSGSLSPSLPTLPSWSPPPPPPPPPPPPPMPPLRYAVSSTPLPPPPPPPPPPPPPPPPSTTPPPPPSFPTSLTHKAPNPSLPLPSTASHEAPLAPPPPPPPPPSFSRAQPLPPPPPFSRAPPPLHGAPPTPSRPPLLPSSGVAPPPPPPPPPTSRAPPPPPPPIRGAPPPPPPMPRAPPPPPPPGGRGPPPPPPPGGRGPAPPPPPSAPGAPPPPRPPGGAPPPPPPLGSKGANLVADSRGRGRGYARSAGVGATASRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVLELEKLFSANVPKPVDSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQVTEFKKSLNTVNSACEEVRKSVKLKEILKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVIAEKSTGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFTVSENDGPVSEVFRKTLKEFIIVAESEVVSLTSLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAGIEKAKGINLTRKSAKDS 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 830 891 - -
Gabi4573g00071 1482 FunFam Formin-like protein 1070 1454 - -
Gabi4573g00071 1482 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gabi4573g00071 1482 Gene3D - 208 336 - -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 509 538 - -
Gabi4573g00071 1482 Gene3D Protein tyrosine phosphatase superfamily 14 207 IPR029021 -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 778 797 - -
Gabi4573g00071 1482 PANTHER FORMIN-J 976 1475 - -
Gabi4573g00071 1482 Coils Coil 1349 1369 - -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 771 1073 - -
Gabi4573g00071 1482 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1144 1469 - -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 814 829 - -
Gabi4573g00071 1482 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 697 711 - -
Gabi4573g00071 1482 Pfam Formin Homology 2 Domain 1078 1442 IPR015425 -
Gabi4573g00071 1482 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1071 1468 IPR015425 -
Gabi4573g00071 1482 Coils Coil 1443 1470 - -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 519 538 - -
Gabi4573g00071 1482 PRINTS Proline rich extensin signature 825 850 - -
Gabi4573g00071 1482 PRINTS Proline rich extensin signature 748 769 - -
Gabi4573g00071 1482 PRINTS Proline rich extensin signature 777 793 - -
Gabi4573g00071 1482 PRINTS Proline rich extensin signature 701 717 - -
Gabi4573g00071 1482 Gene3D Formin, FH2 domain 1072 1454 IPR042201 -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 688 713 - -
Gabi4573g00071 1482 SMART PTEN_C2_2 198 338 IPR014020 -
Gabi4573g00071 1482 SMART it6_source 697 1482 IPR015425 -
Gabi4573g00071 1482 MobiDBLite consensus disorder prediction 908 1049 - -
Gabi4573g00071 1482 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Gabi4573g00071 1482 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00071 Gabi-Chr4573 584250 598354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00071 1047 1482 FH2 protein (formin) Gene Family AT5G07740 79.405 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00071 - - gmx:100785475 1259.2