Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00065 ATGAAGATGTTGAAGTTCATAGCACGAGATAAAGAATTCAGCCGAATCCCTGTTATAATGATGTCTGCACAAGATGAAGTATCTATTGTTGTCAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCGTTAGGCTCTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGATTGGACTTGCAGAGAACAGCATCTTGAATTATGACTTTGATCTGGTAGCATCGGACCCAAGTGATGCCAATACAAATAGTACCACCTTGTTTTCTGATGACATAGATGATAAGTCCAAAAGAAGCACTAATCCGGAGGAAGAAATATCAATCCAACAAGAACAAGAGGCTAGTATTGCCGCAGATATTATTGTTACTGAGGAGCTTCCAGATGCTCATGTATCCGAATGTCAGCCTGATGTGCCTGGAATTAGTGATCGCCGAACAGGTCATTTCTCATCTGCTCCAAAGAAGAGTGAACTAAGAATTGGAGAGTCATCGGCCTTTATCACTTATGTCAAAGCTCCATTGCCGAATAGCAACTTTGAAATGATTTCTCATGTTGGCAATAATGCAACTACACAAGGGATGGTGGAAGATAAGAATCAAGCATGTGCTCAATACAGGGTTAATGACCTTCAACCACACGAAGATGGAGTAACCTTTGAAAGCCATTCACAAGATGACTTACCCAGCAGCAATAGTGTCCCTGATTCTTTCTCTAATGAGAAATCTTGCACTCCGCCTGCATCAAGAGATGTTTCACGGCAAAATCATTACAAGGAAGAACTTCCTCAGGGTGTGGTGAATCCAAGAAATAGAAGTCGAGGTTCTGAGCTTGATGCATCTGGCATGCCTTCCCAACATGCTTATCCATATTATCTTTCAGGAGTTGTTAATCAAGTTATGATGCCATCGTCAGCGCAATTATATCAAAAGAATATCCAGGACCTGCAGAGTCATGCTAATTCATCTATGATTGCACAGTACAATCATCTTCCCCAATGTTTTCCTCATGCAACTGGGATGACATCCATCCCATATTATCCAATGAATATTTGCTTACAAGCTGGTGAGATTTCCCGAGCTCATTCATGGTCACCGTTAGGAAGTTCAAGTTCATGCGAAGTAAAATCAAGGAAATTTGATGGGAGACAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAGCGCTGTTTTGACAAGAAAATTAGGTATGTCAATAGGAAACAACTTGCTGAAAGGCGACCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAATGATGTTAACGTGGATCTTAATGGACAGCCTGCTTCCACTGATTATGATAATGATGATGAAGATGAAGAAGACAACCCTGCCTAG 1383 0.4129 MKMLKFIARDKEFSRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLGSNELLNLWTHMWRRRRMIGLAENSILNYDFDLVASDPSDANTNSTTLFSDDIDDKSKRSTNPEEEISIQQEQEASIAADIIVTEELPDAHVSECQPDVPGISDRRTGHFSSAPKKSELRIGESSAFITYVKAPLPNSNFEMISHVGNNATTQGMVEDKNQACAQYRVNDLQPHEDGVTFESHSQDDLPSSNSVPDSFSNEKSCTPPASRDVSRQNHYKEELPQGVVNPRNRSRGSELDASGMPSQHAYPYYLSGVVNQVMMPSSAQLYQKNIQDLQSHANSSMIAQYNHLPQCFPHATGMTSIPYYPMNICLQAGEISRAHSWSPLGSSSSCEVKSRKFDGRQAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNDVNVDLNGQPASTDYDNDDEDEEDNPA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00065 460 Pfam Response regulator receiver domain 3 53 IPR001789 GO:0000160
Gabi4573g00065 460 SUPERFAMILY CheY-like 3 65 IPR011006 -
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 97 111 - -
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 222 290 - -
Gabi4573g00065 460 Gene3D - 1 140 - -
Gabi4573g00065 460 ProSiteProfiles CCT domain profile. 389 431 IPR010402 GO:0005515
Gabi4573g00065 460 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 208 434 IPR045281 GO:0009909
Gabi4573g00065 460 ProSiteProfiles Response regulatory domain profile. 1 59 IPR001789 GO:0000160
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 142 162 - -
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 229 258 - -
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 435 460 - -
Gabi4573g00065 460 MobiDBLite consensus disorder prediction 90 118 - -
Gabi4573g00065 460 Pfam CCT motif 389 431 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00065 Gabi-Chr4573 546695 552397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00065 1 450 Response Regulator Gene Family AT5G61380 46.382 3.64e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gabi4573g00065 Response_reg 3.5e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00065 K12127 - gmx:100786522 670.618