Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00056 ATGGCCACCGTCACCACACAGGCTTCTGCCACCCTTTTCCGGCCATGTGCCTCCAAATCAAGATTCCTTACTGGTTCTTCTACTAAACTAAACAGGGAAGTGGCTGTTAGTGTTAGACCAATAGGGTCTCCTTCATTTTCATCTTTCAAGGTTCAAGCCAGGAAAGGAGAGTGGTTACCAGGCTTGGCCTCCCCAGGTTATCTAAATGGCAGTCTTCCTGGTGATAATGGATTTGACCCTCTGGGGCTTGCTGAGGACCCTGAGAACTTGAGGTGGTTTGTTCAAGCTGAGCTTGTAAATGGACGTTGGGCCATGTTGGGTGTTGCAGGAATGTTGCTTCCTGAAGTCTTCACCAATATTGGTATCATGAATGTCCCCAAATGGTATGATGCTGGGAAAGAAGAATACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTTTGTTCCATTACGTGGAAATCAGGAGATGGCAAGATATTAAGAACCCTGGAAGTGTCAACCAGGACCCCATCTTTAAGCAGTACAGTTTACCCCCAAATGAGGTTGGATACCCTGGTGGCATTTTTAACCCCTTGAATTTTGCACCAACTCAGGAGGCTAAAGAGAAGGAAATTGCCAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTTCTGGTTCAGCATAACGTGACGGGCAAAGGGCCATTTGACAACCTCTTGCAACATCTCTCAGATCCATGGCACAACACCATTGTCCAAACATGGAGCGGCAACTAA 765 0.4641 MATVTTQASATLFRPCASKSRFLTGSSTKLNREVAVSVRPIGSPSFSSFKVQARKGEWLPGLASPGYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIMNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTQEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLSDPWHNTIVQTWSGN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00056 254 Gene3D Chlorophyll a/b binding protein domain 65 244 - -
Gabi4573g00056 254 Pfam Chlorophyll A-B binding protein 65 224 IPR022796 -
Gabi4573g00056 254 SUPERFAMILY Chlorophyll a-b binding protein 54 251 - -
Gabi4573g00056 254 FunFam Chlorophyll a-b binding protein, chloroplastic 65 244 - -
Gabi4573g00056 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 250 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00056 Gabi-Chr4573 448691 450067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00056 58 247 Chloroplast and Mitochondria Gene Families AT3G61470 56.633 2.94e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00056 K08910 - csav:115709361 473.011