Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00045 ATGGATACTCAAATGGGTTGGCGCTCTTACTATGAAATAGATGAAAACCCATTTCCATTTACATGCCAGTTTTCTTACAGCGGAAATGGTAATGAGTATCCTGCACTAGATTGGTCAAATGAATTTCCCATACAAGATGGTTATCTTGATGCTGTTCCTCTTATGGAGTGCTACCCTTTAGATCCTTTGTATGAAACTCTCGCCATTGAACCAACACCAAGCGTGCAAGTGCAAGATATTGGTTATGTTCTCAATGTTACTACTGCAGATAATGATTTTTATAATATTAAAAAGGGGCTTCCTGTGTGGAATGAGATTGATGCTGGGTTCGATTCAGAAAATGCTTTTGCATTTTGTAACAACGAAGAAAATGGGAAGGAAATGATAAAAGATGGGGAGGTTAAGCGAGGAAGAGAAGAGAGAAGTAGCAACATTAGAATGTTATCAAGGAAGACCATATCTCAGTACTTCTACATGCCCATAACACAAGCAGCAAGGAAGCTTAATGTTGGCTTAACACTTTTGAAGAAAAGGTGCAGAGAGTTGGGAATCCGAAGGTGGCCACACAGGAAGTTGATGAGTCTGCAAACCCTGATAAATAATGTTCAGGAACTGGGGAAAGAGGAGGGGCAAGAGAATGAAGAAAAGTTAAGGAATGCTATTGAGATATTAGAGAAGGAAAAGAAACTCATGGAGGAAATGCCAGATATGCAACTTGAAAATAATACAAAAAGACTTAGACAAGCTTGTTTTAAGGCCAACTACAAGAAGAGGAAGCTCATCGGGTTGAAGGAAGGACGTGCTACAACTACTGACCCAATGGGTGAATATAGTTATGACGAAGATGAACGAGATATTGAATCTCTGTTGTCTGTTACACAGTCGTCTTGCAATCTAATGTTCTAG 906 0.394 MDTQMGWRSYYEIDENPFPFTCQFSYSGNGNEYPALDWSNEFPIQDGYLDAVPLMECYPLDPLYETLAIEPTPSVQVQDIGYVLNVTTADNDFYNIKKGLPVWNEIDAGFDSENAFAFCNNEENGKEMIKDGEVKRGREERSSNIRMLSRKTISQYFYMPITQAARKLNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGQENEEKLRNAIEILEKEKKLMEEMPDMQLENNTKRLRQACFKANYKKRKLIGLKEGRATTTDPMGEYSYDEDERDIESLLSVTQSSCNLMF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00045 301 Coils Coil 207 234 - -
Gabi4573g00045 301 PANTHER PROTEIN RKD4 134 262 IPR044607 GO:0003700
Gabi4573g00045 301 Pfam RWP-RK domain 148 195 IPR003035 -
Gabi4573g00045 301 ProSiteProfiles RWP-RK domain profile. 129 215 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00045 Gabi-Chr4573 396156 397355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00045 135 263 AtRKD Transcription Factor Family AT1G18790 68.182 5.22e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gabi4573g00045 RWP-RK 6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00045 - - gmx:100788666 366.696