Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00031 ATGGAGGGAGATGATGATCTCCACCACCACCAACATCACCACCACCATCAGCATCACCACCGTCAAAACTTCCCATTCCAGCTACTCGAGAAGAAAGAAGATCAAGAAGCCGCATCATGCTCCACCTCCTCCCCATACCCTTCCCTAGCGATCTCCGCAGAACCACCCAACACATCCAATTCAAACCGATCCAACCAGCTAGCGGTGGTGCCACTCTCATCCGACCCCTCCAACAAAAAGCCAGCCCCGAAACGAACCTCCACCAAGGACCGCCACACCAAAGTAGACGGCCGCGGCCGCCGCATCCGAATGCCGGCGCTTTGCGCGGCCCGAGTTTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGAGAAACCATCGAGTGGCTCCTCCAGCAGGCCGAACCAGCCGTCATCGCCGCCACCGGCACAGGAACCATCCCAGCTAACTTCACCTCCCTCAACATATCTCTCAGAAGCTCAGGCTCCACCATGTCCGTGCCATCTCAGCTTAGATCCTCGTACTTCAACCCAAACTTCGCGGTTCAACAACGTAGGAGCTTGTTCCCCGGAATCGGGTTGTCCTCCGAGAACACCAACACCTCCACCACGCTTCTGAATTTCCAATCCAATAACCTAACCGCCAGCATGTTACAGGCGAAGCAGGAGCTTCGCGACGGCGGCGGCGTCGGTGCTCCCTCTTCGTCCACGTTGGATTTGTCAGACACAAACGCAGAAGAAGGTTTGGGAAGGAAACGAAGAACCACCGAACAAGACTTGTCATCGACGCAGCATCAAATGGGGAATTATCTGCTGCAGTCGAGTGCAGGGGCGATTCCAGCGAGTCACGCTCAGGTTCCGGGTAATATATGGATGGTGGCGAATTCAAATAACCAAGTTATGAGTGGTGACCCAATATGGACCTTCCCACAAGTGAATAACAGTGGGTTATACAGAGGCGGCATGTCAAGTGGGTTGCATTTTATGAACTTTCCCACACCCATGGCGTTGTTGCCAAGTCAACAATTAGGTTCATCTGGGATTGGCGTTGTTGGAGGAAGCAGTGGAACTGGGAATATGAATGAAGGTCATTTGAGTATGCTTGCTGGGCTTAGCCCTTATAGGCCTGTGAATATTGGTGTTTCAGAGTCTCAGGCAAGTGGGTCACAATCACATCGCGGTGGCACTGATGATCGACATGATACCACAAGTCACCATTCGTAG 1227 0.5363 MEGDDDLHHHQHHHHHQHHHRQNFPFQLLEKKEDQEAASCSTSSPYPSLAISAEPPNTSNSNRSNQLAVVPLSSDPSNKKPAPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFAVQQRRSLFPGIGLSSENTNTSTTLLNFQSNNLTASMLQAKQELRDGGGVGAPSSSTLDLSDTNAEEGLGRKRRTTEQDLSSTQHQMGNYLLQSSAGAIPASHAQVPGNIWMVANSNNQVMSGDPIWTFPQVNNSGLYRGGMSSGLHFMNFPTPMALLPSQQLGSSGIGVVGGSSGTGNMNEGHLSMLAGLSPYRPVNIGVSESQASGSQSHRGGTDDRHDTTSHHS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00031 408 ProSiteProfiles TCP domain profile. 88 142 IPR017887 -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 379 393 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 1 100 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 82 100 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 246 260 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 226 261 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 23 37 - -
Gabi4573g00031 408 Pfam TCP family transcription factor 86 259 IPR017887 -
Gabi4573g00031 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 381 IPR005333 GO:0003700
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 38 73 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 394 408 - -
Gabi4573g00031 408 MobiDBLite consensus disorder prediction 379 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00031 Gabi-Chr4573 251827 253756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00031 79 343 TCP Transcription Factor Family AT3G47620 47.748 2.61e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi4573g00031 TCP 3.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00031 - - gmx:100790785 553.518