Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00017 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCGAAAGCAAGAGAGCTTGTTAATCAAAAAGAAGGATTAGTTACTTCCAAGGTGTCAGAAACTGGTTTGGCTTTAGAGCCAACCTCCAACACTATTACCAGACATGAGGAAGACCTAGAGCTGGAGAATAAAGAAGCAGAAAATGTTTTAGCTGGAAATCAACAAACAGACACAGTGGGATCTGTTCATCAAGATGCACCGCTTGATCTGGAGAAAATGAAGCAGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGGGCATTTTGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTACTGCTACATTATGCTGTATGTATGGAATTGTCAAGTTACAAGCACTTGTTCGCGGAGGAAGAGTTCGACAGTCTGATGTTGGATTTCAAATCCATGAAAAGTGCAATCTAATGAAGCCTCTGGATGGCAAACTTGTCAAGCCAATTACTATATCCTCAAGAATTACGAAGTTGTCAGCAAATTCTTTCATCCGTAAGCTTCTTGCTTCGTCAACTACAATAATGGCCCTGCGTTTGCATTATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGCTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCGGTTCCCCAACCCAAGAAAATTCGGGAAACCAAGTCTCAGAGAAAGCAGGGTAATGTTTCAATTGGAGATGCTCAAGTGAGCAAGTCAAAACGGACCAACCGGAAGCTTCCTACTGCAAATTTTGATACTGTCCCAGCACAACTGAATCCTGAATTTGAGAAACCAAAACGAAATGTAAGGAAAATACCAAGCCAACCGTCAGATCCTGTGCTGGAAAATCCACAAAATGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATACTGTTCTGCCTGAAGTTGAATCTGAGACCCCAAAGCAGCATTTGGAAAAGGCAACAGTTACCTCAGGTCTTGGTGTTTCAGAACAAGTGGTCATTAGTTCTGACGAGAAGATCAAGAAGGAAGCAACATCAAACATTTCCAGTGTGCCGGATGTGGAAATTACTCCTACACGTTCAGTTAGCAAGGAATTGTCAGACACTCCAAGCAGTCATCAAGTGACTGTGGAATCAAAACCCTTGACTGAGATTACAAGTAAAGATACAAACATTTCTGATGATGAAGTAAAAAATGAGCCCAAAGATTTACCAGAGATTATTTATAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCCCAAGGAAGATCCAACAGGCAGTGAAAACCAGAAACCAACCCGAAAAGCCTCAATTGTATCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAATAGTCCAATTATACCGAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCGCAAGGATCCCCAAGATTTGGACAAGAGGGCAGTGAGAGAAACAACCTTGGTCGGCGACATTCTCTGCCATCTTCAACAAACAGCAAAATTAGTTCGCATTCACCTAGGACACAGAGACCAGTTCAATCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTGA 1752 0.4247 MGKSPGKWIKTVLFGKKSSKSNISKARELVNQKEGLVTSKVSETGLALEPTSNTITRHEEDLELENKEAENVLAGNQQTDTVGSVHQDAPLDLEKMKQEEAATKAQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQATATLCCMYGIVKLQALVRGGRVRQSDVGFQIHEKCNLMKPLDGKLVKPITISSRITKLSANSFIRKLLASSTTIMALRLHYVPGDPNSVLSWLERWSASHFWKPVPQPKKIRETKSQRKQGNVSIGDAQVSKSKRTNRKLPTANFDTVPAQLNPEFEKPKRNVRKIPSQPSDPVLENPQNELEKVKRNLRKVHNPVVENTVLPEVESETPKQHLEKATVTSGLGVSEQVVISSDEKIKKEATSNISSVPDVEITPTRSVSKELSDTPSSHQVTVESKPLTEITSKDTNISDDEVKNEPKDLPEIIYKDENSHLTNGDLSPKEDPTGSENQKPTRKASIVSKQERAENGLQNSPIIPSYMAATESAKAKLRAQGSPRFGQEGSERNNLGRRHSLPSSTNSKISSHSPRTQRPVQSGGKGGNRSDRTVSSSRDGNGKVIQAEWRR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 258 289 - -
Gabi4573g00017 583 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Gabi4573g00017 583 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 528 574 - -
Gabi4573g00017 583 Gene3D - 95 144 - -
Gabi4573g00017 583 PANTHER IQ-DOMAIN 5-RELATED 1 542 - -
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 250 319 - -
Gabi4573g00017 583 Coils Coil 59 79 - -
Gabi4573g00017 583 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 457 476 - -
Gabi4573g00017 583 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 388 425 - -
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 426 447 - -
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 483 498 - -
Gabi4573g00017 583 MobiDBLite consensus disorder prediction 388 583 - -
Gabi4573g00017 583 Pfam Protein of unknown function (DUF4005) 481 562 IPR025064 -
Gabi4573g00017 583 SMART iq_5 120 141 IPR000048 GO:0005515
Gabi4573g00017 583 SMART iq_5 97 119 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00017 Gabi-Chr4573 141531 148242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00017 1 583 IQD Protein Family AT1G74690 46.067 2.59e-134 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00017 - - gmx:100794636 914.064