Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00014 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCGAAAGCAAGAGAGAAGCTTGTTAATCAAAAAGAAGGATTAGTTACTTCCAAGGTGTCAGAAACTGGTTTGGCTTTAGAGCCAACCTCCAACACTATTACCAGACATGAGGAAGACCTAGAGCTGGAGAATAAAGAAGCAGAAAATGTTTTAGCTGGAAATCAACAAACAGACACAGTGGGATCTGTTCATCAAGATGCACCGCTTGATCTGGAGAAAATGAAGCAGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGGGCATTTTGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTACTGCTACATTATGCTGTATGTATGGAATTGTCAAGTTACAAGCACTTGTTCGCGGAGGAAGAGTTCGACAGTCTGATGTTGGATTTCAAATCCATGAAAAGTGCAATCTAATGAAGCCTCTGGATGGCAAACTTGTCAAGCCAATTACTATATCCTCAAGAATTACGAAGTTGTCAGCAAATTCTTTCATCCGTAAGCTTCTTGCTTCGTCAACTACAATAATGGCCCTGCGTTTGCATTATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGCTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCGGTTCCCCAACCCAAGAAAATTCGGGAAACCAAGTCTCAGAGAAAGCAGGGTAATGTTTCAATTGGAGATGCTCAAGTGAGCAAGTCAAAACGGACCAACCGGAAGCTTCCTACTGCAAATTTTGATACTGTCCCAGCACAACTGAATCCTGAATTTGAGAAACCAAAACGAAATGTAAGGAAAATACCAAGCCAACCGTCAGATCCTGTGCTGGAAAATCCACAAAATGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGAATACTGTTCTGCCTGAAGTTGAATCTGAGACCCCAAAGCAGCATTTGGAAAAGGCAACAGTTACCTCAGGTCTTGGTGTTTCAGAACAAGTGGTCATTAGTTCTGACGAGAAGATCAAGAAGGAAGCAACATCAAACATTTCCAGTGTGCCGGATGTGGAAATTACTCCTACACGTTCAGTTAGCAAGGAATTGTCAGACACTCCAAGCAGTCATCAAGTGACTGTGGAATCAAAACCCTTGACTGAGATTACAAGTAAAGATACAAACATTTCTGATGATGAAGTAAAAAATGAGCCCAAAGATTTACCAGAGATTATTTATAAAGATGAAAATTCTCACTTAACAAATGGAGATTTGAGTCCCAAGGAAGATCCAACAGGCAGTGAAAACCAGAAACCAACCCGAAAAGCCTCAATTGTATCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAATAGTCCAATTATACCGAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAGTTGAGGGCGCAAGGATCCCCAAGATTTGGACAAGAGGGCAGTGAGAGAAACAACCTTGGTCGGCGACATTCTCTGCCATCTTCAACAAACAGCAAAATTAGTTCGCATTCACCTAGGACACAGAGACCAGTTCAATCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCAGAGTGGAGGAGGTGA 1755 0.4245 MGKSPGKWIKTVLFGKKSSKSNISKAREKLVNQKEGLVTSKVSETGLALEPTSNTITRHEEDLELENKEAENVLAGNQQTDTVGSVHQDAPLDLEKMKQEEAATKAQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQATATLCCMYGIVKLQALVRGGRVRQSDVGFQIHEKCNLMKPLDGKLVKPITISSRITKLSANSFIRKLLASSTTIMALRLHYVPGDPNSVLSWLERWSASHFWKPVPQPKKIRETKSQRKQGNVSIGDAQVSKSKRTNRKLPTANFDTVPAQLNPEFEKPKRNVRKIPSQPSDPVLENPQNELEKVKRNLRKVHNPVVENTVLPEVESETPKQHLEKATVTSGLGVSEQVVISSDEKIKKEATSNISSVPDVEITPTRSVSKELSDTPSSHQVTVESKPLTEITSKDTNISDDEVKNEPKDLPEIIYKDENSHLTNGDLSPKEDPTGSENQKPTRKASIVSKQERAENGLQNSPIIPSYMAATESAKAKLRAQGSPRFGQEGSERNNLGRRHSLPSSTNSKISSHSPRTQRPVQSGGKGGNRSDRTVSSSRDGNGKVIQAEWRR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00014 584 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 389 426 - -
Gabi4573g00014 584 Pfam Protein of unknown function (DUF4005) 482 563 IPR025064 -
Gabi4573g00014 584 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 427 448 - -
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 389 584 - -
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 251 320 - -
Gabi4573g00014 584 Coils Coil 60 80 - -
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 484 499 - -
Gabi4573g00014 584 Gene3D - 96 145 - -
Gabi4573g00014 584 PANTHER IQ-DOMAIN 5-RELATED 1 543 - -
Gabi4573g00014 584 SMART iq_5 98 120 IPR000048 GO:0005515
Gabi4573g00014 584 SMART iq_5 121 142 IPR000048 GO:0005515
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 259 290 - -
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 529 575 - -
Gabi4573g00014 584 MobiDBLite consensus disorder prediction 458 477 - -
Gabi4573g00014 584 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Gabi4573g00014 584 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00014 Gabi-Chr4573 141520 148242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00014 1 584 IQD Protein Family AT1G74690 46.067 2.27e-136 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00014 - - gmx:100794636 920.613