Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4573g00011 ATGGAGTTCGCTTCGGGGAGATCTGTTCTTGGAGGTGGTGGACTCAAGGAAGAGAAGAGAAGTGATGAGCATAGTATTGGTGATGATGAAGGTCGTCATAAACAAGAGAATATTGTCGAGGAGGCGCCCAAGGCTAATACCGAAAGATCCATGCTGGAGGCTGGACCAAGCACATCCTCAGCCAAAAAGGAAGAGGTGGATGATCAGCTTGAGACTACTAAAGCCGAAATGGGTGAAGTGAGAGAAGAAAATCAACGGTTAAAGATACGTTTGAACAAAATGATGAATGAATACCGGACACTAGAAATGCAATTTCATGATATAGTTAAGCAAGGAACAAAAAAGAGTGCTAAGAAAGGAAATGATAACCATCAAGAAATTATAGAGGAATCAGATCTTGTTTTCCTCAGTCTTGGAAGAGCTCCGAGTAATCCAAGAAATGATGAGAAAGTTATTAAAGTCTCTAAACCTTGGAAGGATGAAGAGTTTAATGAAAACTTGACTCTTGGACTAGACTTCAAATTTGAAACATCAAAATCAGGAAGCACAACTGAAGCTTTGCCAAATCCAAGCCCAGCCAATAGTTCTGAAGTACGAAAAGAAGAAGCTGGAGAAACTTGGTCACATACTAAGGCACTCAAGACTCTGAGAGATACAGAGGATGAAGTTTCTCAGCAAAATCCTTCAAAGAAAGCTAGAGTTTGCGTGAGAGCAAGATGTGACACCCCAACAATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAGATTGCAAAGGGAAATCCTTGCCCTCGGGCTTACTATCGTTGCACAGTTGCACCATCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGTTGAGGACATGTCAATTTTAATCACTACCTATGAAGGGACCCACAACCACCCTCTTTCTCTTTCAGCTACTGCAATGGCTTCCACAACTTCTGCAGCTGCTTCCATGCTATTATCTGGTTCATCAAGCTCTCACTCTGGCACAATGCCTTCAACAACCACAACCAACAATGCTGCTAATCTCTATGGCCTGAATTTCTATTTACCAGATGGTTCCAAATCAAAGCAGTTATTCCTGTCTAACCCTGCACTATCATCTTCACCTTCACATCCAACCATCACTCTTGACCTCACTTCAAACCCAAGCTCTTCCTCATCTCCCTTTGTTAGATTTACTTCAAACTACAACCAACCTAGATACCCTTCATCCACAAGCCTAAACTTCAGTGCTTCCTCAGAATCCTCCAATGCAATGTCTTGGAGCAATGGGTTCCTCAACTACGGTACTCGACCATATAACAATAATAGGAACATTCTTAGCAATGTAAACTTTGGAAGACAACCAATGGAAAATATCTACCAATCCTATATGCAAAAGAACAACAACTCAATCCCTCCTCAAAGTGCTCAAAATGCTCAACCAGATAATATATCTGCAGCAACGAAAGCAATCACAGAAGACCCTACTTTTCAATCAGCTTTGGCAGCAGCACTTACTTCATTTATTGGAGCAGGAACTGATATTGGAAGCATCCAAGGAAATCAAGGTGTTGGAGAAAACTTGGGTCAGAAAATGAAATGGGCAGAGCTGTTTTCAGCGTCTAATACTTTGCCTTCAACTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTGAACAAAACATCCACGAATACACAAACGGGAAGTTTAACATTGCTACCACCGTCTTTGCCATTTTCTTCTCCCTCCAAAAGTGCATCTGCATCTCCTGGTGATAATAGCGATAACACCAAATAA 1794 0.4158 MEFASGRSVLGGGGLKEEKRSDEHSIGDDEGRHKQENIVEEAPKANTERSMLEAGPSTSSAKKEEVDDQLETTKAEMGEVREENQRLKIRLNKMMNEYRTLEMQFHDIVKQGTKKSAKKGNDNHQEIIEESDLVFLSLGRAPSNPRNDEKVIKVSKPWKDEEFNENLTLGLDFKFETSKSGSTTEALPNPSPANSSEVRKEEAGETWSHTKALKTLRDTEDEVSQQNPSKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHPLSLSATAMASTTSAAASMLLSGSSSSHSGTMPSTTTTNNAANLYGLNFYLPDGSKSKQLFLSNPALSSSPSHPTITLDLTSNPSSSSSPFVRFTSNYNQPRYPSSTSLNFSASSESSNAMSWSNGFLNYGTRPYNNNRNILSNVNFGRQPMENIYQSYMQKNNNSIPPQSAQNAQPDNISAATKAITEDPTFQSALAAALTSFIGAGTDIGSIQGNQGVGENLGQKMKWAELFSASNTLPSTSKVNGCASSFLNKTSTNTQTGSLTLLPPSLPFSSPSKSASASPGDNSDNTK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4573g00011 597 Coils Coil 63 104 - -
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 179 196 - -
Gabi4573g00011 597 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4573g00011 597 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4573g00011 597 SUPERFAMILY WRKY DNA-binding domain 238 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 179 207 - -
Gabi4573g00011 597 Pfam WRKY DNA -binding domain 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 60 82 - -
Gabi4573g00011 597 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 563 597 - -
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 1 82 - -
Gabi4573g00011 597 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 519 IPR044810 GO:0003700
Gabi4573g00011 597 FunFam probable WRKY transcription factor 31 230 307 - -
Gabi4573g00011 597 MobiDBLite consensus disorder prediction 13 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4573g00011 Gabi-Chr4573 112185 116361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4573g00011 77 529 WRKY Transcription Factor Family AT5G15130 42.886 9.72e-82 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4573g00011 WRKY 8.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4573g00011 - - pvu:PHAVU_003G192000g 731.865