Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4564g00001 ATGGAAAGAATGTTCCCTCCCAAGAAGCCCTCAAGTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTCACCACAGACCCAAAACCTCGTCTCCGTTGGACTGTTGAACTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGTGTAAAGGGTCTCACCCTTTACCACCTGAAGAGCCACCTTCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGAATTCAATGATCATTCAATTAAGGATGAACTGCAAAGAAGTACTGCTTCGTCTTCTGCCATCATGGGTCGCAACATGAATGAGATGCAAATAGAGGTGCAAAGAAGACTGCATGAACAACTTGAGGTTCAAAAACACCTTCAGTTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAAGCTTATCAAACACTTGCAGGTGAAAACATGACATCTTCTGCCACTAACTTAAAGGGTATTGTACCTCATCAAGGGATCCATGAAATTGGAGTCATGAAAGAATTTGGCTCCCCTCTTAACTTTTCTTCTTTTCAAGATCTTGACATTTATGGAGGTGGTGACCAACTTGACCTTCAGCACAACATGGAGAAACCAACCCTTGAGGGGTTTATGCCAATTAATGAGAATTTGTGTCTTGGGAAGAAGAGGCCTAACCCTTATAGTGGTAGTGGAAAGAGCCCTTTGATATGGAGTGATGATCTTCGCCTTCAAGATTTGGGGACACCCTCATCATGCCTTGGTCCTCAAGATGATCCTTTCAAAGGTGACCAGATTCATATTGCACCAACATCAATGGATAGAGGCAGTGACATTGATTCCATGTCAGAGATCTATGACACAAAGCCCTTACTCCAAGGGGAAGTTTTAGGTGAAAAGAAATTTGATGCATCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCTCTTCAAGCTGAAAGGATGAGTCCTATGATCAGTACTGGTACCTTGGCACAAGGTAGAAACTCACCATTTGGTTGA 1080 0.4361 MERMFPPKKPSSMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDELQRSTASSSAIMGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMTSSATNLKGIVPHQGIHEIGVMKEFGSPLNFSSFQDLDIYGGGDQLDLQHNMEKPTLEGFMPINENLCLGKKRPNPYSGSGKSPLIWSDDLRLQDLGTPSSCLGPQDDPFKGDQIHIAPTSMDRGSDIDSMSEIYDTKPLLQGEVLGEKKFDASMKLERPSPRRAPLQAERMSPMISTGTLAQGRNSPFG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4564g00001 359 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Gabi4564g00001 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 176 IPR044848 GO:0003700
Gabi4564g00001 359 MobiDBLite consensus disorder prediction 342 359 - -
Gabi4564g00001 359 MobiDBLite consensus disorder prediction 326 359 - -
Gabi4564g00001 359 FunFam Myb family transcription factor 34 92 - -
Gabi4564g00001 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Gabi4564g00001 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Gabi4564g00001 359 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Gabi4564g00001 359 Gene3D - 34 92 - -
Gabi4564g00001 359 Pfam MYB-CC type transfactor, LHEQLE motif 124 163 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4564g00001 Gabi-Chr4564 76171 78361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4564g00001 4 359 G2-like Transcription Factor Family AT1G79430 57.825 1.10e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4564g00001 Myb_DNA-binding 1.9e-06 CL0123