Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi455g00009 AGAATTAGTTCAGACCAGTTCAATGCTGAGCGAGCAAAGGCTGGGAGTCTGTATGTATGTGGGTGTCCCGGAACTGGGAAATCATTGTCTATGGAGAGGGTGAAAGAGCTTTTGATGAACTGGGCTACAGAGGCTGGTTTCTCGCTGCCAGATATTTTATCTGTAAATTGTACATCCCTTGCCAATACATCTGATATTTTCACTAAGATACTTGGGTTAAACCAAGGACGGGGAAAAAAGGTTTCAGCCACACCCTTACAACAACTTCAGAACATATATTCTCAGAAATCATCTATCAAGAACATGATATTGATAGTAGCTGATGAATTAGATTACCTAATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTTACTACCTTCCCATTTTCCAGATGTATATTAGTAGGTGTAGCAAATGCAATTGACCTAGCTGATCGATTTCTTCCGAGGCTTACATCATTAAATTGCAAGCCTATTGTTGTAACTTTTAGGGCATACTCTAAAGATCAGATCCTTAGGATTCTCGAAGAAAGGCTAAATGAACTTCCTTACACTGTCTTCCGACATCAAGCACTGGAACTATGTGCTAGGGTAGGTCCACTTGTGATTTGTCACATCTTTTATAGTCTTTGCCAAGGAAAGAGTGCAATAGAGATGCTAGAAGCAGAAATTAGAGAATCTGCCTGCAATTTGAATACTTCATTGGAAGAGAAGTCATCCTCCCAGCAAAGTCTTGCTACAGCTCCTGATTTTATGAAAAAACAAGAATTTGATATTGTAAGGGTTGATCATATGGCTCTTGCCTTGTCAAAGACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTTTGCTCTTTGGTGAAGCAATTCCGTGGAGCCAAGAAAGATGCAATCCTTGGGGAGTTGTATAAGTCTTACATGGAGATATGCAAATCATCACTCGTTCCCCCGGCAGGAATCCTAGAATTTTCAAACATGTGCAGAGTGCTGAGTGGTCAGGGGCTGATTAAACTAGGACAATCCCGAGAGGATAAATTGAAAAGAGTGACACCCAAAGTAGATGATGGTGATATTACTTTTGCATTGCAGGGAATCCGTTTTTTTCGAAACTGTCTTAAATGTTTCTGCTGA 1167 0.4036 RISSDQFNAERAKAGSLYVCGCPGTGKSLSMERVKELLMNWATEAGFSLPDILSVNCTSLANTSDIFTKILGLNQGRGKKVSATPLQQLQNIYSQKSSIKNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILVGVANAIDLADRFLPRLTSLNCKPIVVTFRAYSKDQILRILEERLNELPYTVFRHQALELCARVGPLVICHIFYSLCQGKSAIEMLEAEIRESACNLNTSLEEKSSSQQSLATAPDFMKKQEFDIVRVDHMALALSKTYRSPVVDTIQSLPHHQQIILCSLVKQFRGAKKDAILGELYKSYMEICKSSLVPPAGILEFSNMCRVLSGQGLIKLGQSREDKLKRVTPKVDDGDITFALQGIRFFRNCLKCFC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi455g00009 388 SUPERFAMILY "Winged helix" DNA-binding domain 280 383 IPR036390 -
Gabi455g00009 388 CDD Cdc6_C 288 370 IPR015163 -
Gabi455g00009 388 Gene3D - 5 159 IPR027417 -
Gabi455g00009 388 SMART Cdc6_C_2 295 374 IPR015163 -
Gabi455g00009 388 Pfam AAA domain 13 129 IPR003593 GO:0016887
Gabi455g00009 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 202 IPR027417 -
Gabi455g00009 388 Coils Coil 220 240 - -
Gabi455g00009 388 Gene3D - 285 367 IPR036388 -
Gabi455g00009 388 PIRSF Cdc6 6 386 IPR016314 GO:0006270|GO:0051301
Gabi455g00009 388 FunFam Cell division control protein 287 377 - -
Gabi455g00009 388 Gene3D - 160 284 - -
Gabi455g00009 388 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 7 383 - -
Gabi455g00009 388 Pfam CDC6, C terminal winged helix domain 295 373 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi455g00009 Gabi-Chr455 159274 164511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi455g00009 10 384 Core DNA Replication Machinery Family AT2G29680 59.894 3.75e-157 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi455g00009 K02213 - gmx:100787371 605.134