Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi455g00002 ATGAAATTCGAAATTAGCATAATCATCAGTATTAGTTTTCCTAATTTCGAGGGATGTTACACATATATTGGGTTTGCAGCTCTCAACGGACATGACATACCAGGAACTTCTGATGATTCTGGGATTGATAATATGCCGAAACATCATAGGCCATATACAAAATTATCTAATGTTGAAGAAAAGCTGATAAACTGCAGTCCAGCAACCAAACATTCTATCAAATCCCGAATAAAAGCATTTCTTCCTGAAGAGATATACAGAAAGAAGGGTAGACATAAGAGAAGCTCAACCTGTCCTGTAAAGTCACAACTAACACGTGTCGATTCAGTTCATCACTTGGAGGTTGATCCACTTAGTGAACTGTTATTAACTGTTGAGAGTCCTGAACCAGTTCTGGAAACCTTTCAAAACCATCTTGCTGCGGGCACATTGGATGTATTGTCACCAGTTTTCTCTGAGAAACCAATTACCAACCATGACAAATGTGTAGACTGTGGTACAATGTTTTCTAGTGACAATTTGGAACATTGCAAGACTCATAAACATCATAAGCAATGTACAGATACCAAAAACTTGAGCTCTTCTGATCAAGGTGTGCCAGAAGAGAAGTTGATGAATGCAAAGATTCTTACAACTGATGCTTCACCCCATCTTTTCAAGGATTTTCTTGATGCTCTTGATGTAATCAACACAAACAAGGATTTTCTATTAAAATATATACAGGATCCAGGTTCTCCTTTGCCATTCAACATTCATAATCAACCGTCTTTTGGTAGTAAATCAAGACGAGCCAAATCTATCTCATTTCCTGTATCTGGTTCATCATCAGGAAGCAAAGATCCTGAGCCAGGCCAACTCATAAACAAGATGGTAGATGACTGGTTCAATGCAAAAGGGGAGGAGACACAGTTACAACTTCAAAGTCAGATGCAAAACGTATCCATGTCTCAGTCTTCAGGTTCTTCACAAAAAGTTGATCAATTCCTCAATCAAGAGAAAGAATGGACTAAAAGAGATTCTAATTCTTCAACAGTTTCGTCCCAGGTTCCCAACCATGTAAAAGCTAAGCATTTCAAGGATTTTAGAAAGAAGTTAAAGCATATAATTGAAGAAAGCAAAAATGAGAAGCATCGCATTACCAAGGATGCGATACTTGACAAAATTCCTCATGGAAATAGGCTTTCCAAGAATGTAAGGAAGTATATCCATGACAAATCCAAAGACCCCACAATTAATGAAGAAGGAAAAGACAGTGCCACAAGTGGTTATGGTACTCGTTTCTCTAATTCCTTCAACAAGCGTCAACTATCAGCCATGAGGACTTCATCTCTAAAAGAATCAGTTGGTAGATATTCTCAGCTGTATGAGACATGTTTCAACAGTGAAGTCAAGTTTCCAAAAATTGATAGCTTAAGATTGAGAACAGAAGAGAGAAGTTCAATACTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCGTTACCTAATCTAAAATCTTACTTCCAGCAGAGTGAAGAGCCTCCTGTTCTTTTATCTCCCCAGGATTCAATAAGGAAATATGGAGATAGAACCACAAACACAAGTGTTACCGATCAGCAGAGGAGGATTGGCGCTAATGAAGACTCAGAGAGTCAAATTTTGCCACCTACACTTGCTGATAACACAAATCAAGAAAGCACCTTGAATGCTGACAAAAAGCAACTTTTTCTCAGAAGTGCTTCTAAATCAGGGTTAAATGTTGATGATGAGGCAAAGGCAGATAAAATCATAGGAATTGATGGTTTAGAAAACTTGAGAGACAGTGGTCAACCTGTTTGCAATGAACAGGATGCTGGACCTGCAACAGAATCTGCTACTATGCTAGTTGAAGCAAACTCAGTGTTCTCTTCTGACAGCTTCCTAGATGATACATTTGAATTTGAGACGTTAAACGAACTTGAAGAAACAATTTCAGAATTAAAGCCAGGGCCGGATGATGGATTGGATAATATGGCTGAGCAACAAGAGGAGGTGGTTGAGAATGGAGAGAATTTTCAGAACCTTGGAACTCTAAGCAAACGCTTCAACTATGAAATTCCATGTATTGAAGTGGATACAAGTAATGAAGCTGCATTTAATTATGTTAGAAAGGTTTTGGAGCTCTCTAGTTTCACTGGCAATCAATCCCTTGGGATATGGTATTCTGATGACCAACCAGTTGATCCTTCAGTGTATGAAGAATTGGAAGGTTGCTTGCTTCTGGATCCTGATTGCTCTGGTAATTGTGATGAAGGTGGACAATGTAATCATCTACTTCTTTTTGATATAATCAATGAGGGATTGTTGGAGATTTTTGGGAGATCATACAACTATTATCCCAGACCCTTGTCTTCGCTCTGCCATGTTCATCCATTGCCAGCAGGAGACAATGTTCTCCATAAAGTATGGACACTTATTAGCTGGTATCTGAACTCAACATCTGAGGTTTACCCTTCATTGGATTACTATGTGAGCAGAGATCTAGCAAAAAATGATGGGTGGATGAATCTTCAATTTGATTCTGAATTTGTGGGGCTTGAGCTAGATGACTTTATTTTTTATGATCTTTTGGAGGAAATTATCTGCACTTGA 2610 0.3831 MKFEISIIISISFPNFEGCYTYIGFAALNGHDIPGTSDDSGIDNMPKHHRPYTKLSNVEEKLINCSPATKHSIKSRIKAFLPEEIYRKKGRHKRSSTCPVKSQLTRVDSVHHLEVDPLSELLLTVESPEPVLETFQNHLAAGTLDVLSPVFSEKPITNHDKCVDCGTMFSSDNLEHCKTHKHHKQCTDTKNLSSSDQGVPEEKLMNAKILTTDASPHLFKDFLDALDVINTNKDFLLKYIQDPGSPLPFNIHNQPSFGSKSRRAKSISFPVSGSSSGSKDPEPGQLINKMVDDWFNAKGEETQLQLQSQMQNVSMSQSSGSSQKVDQFLNQEKEWTKRDSNSSTVSSQVPNHVKAKHFKDFRKKLKHIIEESKNEKHRITKDAILDKIPHGNRLSKNVRKYIHDKSKDPTINEEGKDSATSGYGTRFSNSFNKRQLSAMRTSSLKESVGRYSQLYETCFNSEVKFPKIDSLRLRTEERSSILKTPKSFKRFLSLPNLKSYFQQSEEPPVLLSPQDSIRKYGDRTTNTSVTDQQRRIGANEDSESQILPPTLADNTNQESTLNADKKQLFLRSASKSGLNVDDEAKADKIIGIDGLENLRDSGQPVCNEQDAGPATESATMLVEANSVFSSDSFLDDTFEFETLNELEETISELKPGPDDGLDNMAEQQEEVVENGENFQNLGTLSKRFNYEIPCIEVDTSNEAAFNYVRKVLELSSFTGNQSLGIWYSDDQPVDPSVYEELEGCLLLDPDCSGNCDEGGQCNHLLLFDIINEGLLEIFGRSYNYYPRPLSSLCHVHPLPAGDNVLHKVWTLISWYLNSTSEVYPSLDYYVSRDLAKNDGWMNLQFDSEFVGLELDDFIFYDLLEEIICT 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi455g00002 869 MobiDBLite consensus disorder prediction 520 556 - -
Gabi455g00002 869 MobiDBLite consensus disorder prediction 255 282 - -
Gabi455g00002 869 Pfam Domain of unknown function (DUF4378) 705 865 IPR025486 -
Gabi455g00002 869 MobiDBLite consensus disorder prediction 255 286 - -
Gabi455g00002 869 Coils Coil 362 382 - -
Gabi455g00002 869 Pfam Protein of unknown function (DUF3741) 202 245 IPR022212 -
Gabi455g00002 869 PANTHER PROTEIN TRM32 52 869 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi455g00002 Gabi-Chr455 46417 50349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi455g00002 213 859 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 34.299 3.53e-85 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi455g00002 - - gmx:100807303 1092.8