Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi455g00001 ATGGGTCAGGTCAGGTCAGGTTTTTGTGCGACTCGACTCAACTTGGTTTTTATAGGTCAGATTGCAATAGGGATAGCTCGAGGACTTGAGTACTTGCATGCTGGATGCAACACTAGGATTCTGCATTTTGACATTAAACCACATAATATCCTTCTGGATGAAACTTATAGCCCAAAGATATCAGATTTCGGGCTTGCTAAGCTCAGCACAAGGGATAATAGCATTGTTTCAATGTCAAATGCTAGAGGGGCAGCTGGCTATGGAATGATGCTGCTAGAAATGCTAGAGGGACAGTTGGGTATTTTGAAAGGATTTTGGTATAACATGGAAAATGGTGGACCTGCACCGGAGGGAATTACTAACAAGATGTATGAGTACACAACAACAATTAAGGAGTACTTGATTGCTGAAGATCTGCCTGATGTGGATATCTCCAGGGCAGGTGTTGCAAACTGTACAGGCCCTGAAGGACCATTTTGA 480 0.4313 MGQVRSGFCATRLNLVFIGQIAIGIARGLEYLHAGCNTRILHFDIKPHNILLDETYSPKISDFGLAKLSTRDNSIVSMSNARGAAGYGMMLLEMLEGQLGILKGFWYNMENGGPAPEGITNKMYEYTTTIKEYLIAEDLPDVDISRAGVANCTGPEGPF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi455g00001 159 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 87 IPR045874 GO:0004672
Gabi455g00001 159 FunFam Os07g0541700 protein 9 85 - -
Gabi455g00001 159 Gene3D - 102 156 - -
Gabi455g00001 159 SUPERFAMILY Protein kinase-like (PK-like) 12 98 IPR011009 -
Gabi455g00001 159 Pfam Protein kinase domain 20 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi455g00001 159 Gene3D Transferase(Phosphotransferase) domain 1 8 99 - -
Gabi455g00001 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi455g00001 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 40 52 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi455g00001 Gabi-Chr455 40368 42492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi455g00001 13 87 Receptor kinase-like Gene Family AT5G38260 61.333 4.07e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gabi455g00001 Pkinase 3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi455g00001 - - gmx:100816285 121.709