Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4559g00002 ATGGCGTCTGGATCGTCCGGTCGCGGTAACTCCGTCTCCAAAGGGTTCGATTTCGGTTCCGATGACATCCTCTGCTCCTACGATGACTTCGCCAACAGGGATTCGAATTCCAATGGCAATCACACCGATCCCGTTATGGCCCCCAATTCAACTAAGGATTTTAACAAATCAAGGATGGCAAGGACATGTATGTTTCCTGCTTCTGCCTATAATCCGCCTGAAGATTCTTTAAGCCAAGATGTGATTGCAACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGATTTCTTGAGGGAATTAGTTCAAGGCTATCGCAGTTGGAATTATATTGCTACAATCTTGACAAATCTATTGGAGAAATGAGATCTGATTTAAATCGTGATCATGGGGAGCAAGATTCAAAGCTCAAATCTCTTGAAAAGCACATTCAGGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAGTCATCTTCCTCAAGCCATCCTCAGTCTAATGAGGAGAGATCTTCTCCTTCTATCACGGATTCCAAAAAAACTGATAATGCATCGGATGCACACAACCAGCAGTTAGCTCTTGCTCTGCCCCATCAAATTGCCCCTCAGCAGCAGCCTGCGGCACCCCAGACCCAAACTCCTGCACCAAATGTGACTCAAGCTACTCAACAACCTCCTTATTACATGCCTCCCCCTCCACAAGCTGTGGCCCAGCTCTCCCAGAATCAGTATTTACCTTCTGATCAACAATATCGAGCACCCCAACTACAGCAACCAACACCATCTCAAGTAACCCCGTCCCCACCTGCGCAGCAATATTCTCAGTATCAGCAGCCACAGCAACAACTGCCGCAGCCGCCGCAGCAGCAGCAATGGCCGCAGCAGGTGCAACCTCCACAACAACCCTCAATGCAACCTCAAATGAGACCCCCCTCATCAAGTGTGTATCCTCCATACCAGCCAAGTCAAGCAACAAATCAATCTCCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGGCATATTCAGGGGTTCCTCCACCTGGGTCTAGCCGTGCTGATACCATACCATATGGATATGGAGGAGCTGGTAGAACAGTTCCACAGCAATCCCCACCCCAGCAACAGATCAAGGGGTCTTATACTGCACAAGGAGGTGACATGTATGGAACTTCCGGGACCCACCCGGCGCTGCCTCCTCCTCCTCCTGGTAGTGCATACATGATGTATGATGGTGAAGGAGGAAGAACACATCTTCCACCACCCCAACCTCATTTTGCTCAAGGTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCCACAGGTCATAATCTTATGGTAAGAAATCCTAGCCAGTCACAATTTGCTCGCAACCATCCATACAATGAGTTGATTGAGAAATTGGCGAGCATGGGATTCAGGGGTGAACATGTGGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGCCTATAGATTTCAACTCTGTACTTGACAGGTTGAATGTGCATGGCTCTGTGGGTCCCCAAAGAGGATGGTCAGGGTAA 1617 0.4811 MASGSSGRGNSVSKGFDFGSDDILCSYDDFANRDSNSNGNHTDPVMAPNSTKDFNKSRMARTCMFPASAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEQDSKLKSLEKHIQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHPQSNEERSSPSITDSKKTDNASDAHNQQLALALPHQIAPQQQPAAPQTQTPAPNVTQATQQPPYYMPPPPQAVAQLSQNQYLPSDQQYRAPQLQQPTPSQVTPSPPAQQYSQYQQPQQQLPQPPQQQQWPQQVQPPQQPSMQPQMRPPSSSVYPPYQPSQATNQSPTETLPNSMPMQMAYSGVPPPGSSRADTIPYGYGGAGRTVPQQSPPQQQIKGSYTAQGGDMYGTSGTHPALPPPPPGSAYMMYDGEGGRTHLPPPQPHFAQGGYPPTSASLQNPTGHNLMVRNPSQSQFARNHPYNELIEKLASMGFRGEHVASVIQRMEESGQPIDFNSVLDRLNVHGSVGPQRGWSG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 172 207 - -
Gabi4559g00002 538 Coils Coil 139 175 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 339 360 - -
Gabi4559g00002 538 Pfam UBA-like domain (DUF1421) 484 528 IPR010820 -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 273 371 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 288 319 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 320 338 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 172 193 - -
Gabi4559g00002 538 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 538 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 222 245 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 389 407 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 386 407 - -
Gabi4559g00002 538 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4559g00002 Gabi-Chr4559 4956 9589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4559g00002 84 183 Trihelix Transcription Factor Family AT3G01560 36.000 3.82e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4559g00002 - - gmx:100782994 669.848