Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4557g00003 ATGGCCGAGGTGATCAACATGCCGCCAGATTCTATCGACCAATCCCCCTCTGCTTCAGCTCCTCCGCCGCCTCCCGCCGCTCCTCCCGTCGCCGTCGACGATGATCTCCCGCCTCCGCCTCTTCCTCCGCCTTCGCGGCGGAGGGACCGCAGGGACGATAGGGATTTCGACCGCCACCCTAACCGCAGCCGCGGAAGCGATTACTCTGACCGGAACGTGTCGCCAAGGGACCGTGACAGGGACTTCAAGCGCCGACGCAGCCCTAGCCCTGGCTACCGTGACCGCCGTTATTCTCCTCCTCCTCCTCCGTCGAGACGTTCTCCTCCGCCGTATAAGCGACCGAGGAGGGGGAGCCCCCGCGGCGGCGGCGGAGGTTATGGACCTGATGAAAGCAGATTTGGCTATGATTATTTTGGTGGTTATGAACGGGGAATGGGTGGAAGACCTGGTCACACAGATGAGAAGTCTTATGGCAGGTTCGCACATCGATCTGCTGGGGGATATCAAAATGGGATTTCCGATGTGGATATGAATCGCGGTTATGCAAATTTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCAGCTGAAGCTGAGCGGAGGTATCAGGAGTACAAATCAGAGTATATTTCTACTCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAATGGTTGAAAGATAAATATCATCCAACAAATCTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTGCTTGATTTGCAGAGTGGAACATTAAACCTAAATCCTGGTTTAAACTCCTCTTCATCCAGTAAATCAGGGCAAGCCAGCGAGCCAAATTCAGAGGAGGAAACTGATGCTGGTGGAAAACGAAGAAGACATGGTAGGGGATCTAATAAAGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCATATCAGTTCTGAGCCTAGACGGATACAAGCAGATATCCAACAGGCTCAGGCTGTTGTTCGTAAGCTGGACATGGAAAAGGGGATTGAAGATAATATTTTATGCATCAGTGATCATAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGCCCCATAATAATTATACGGGGCCTAACATCTGTTAAGGGCTTGGAGGGTGTTGAGCTACTGGACACACTTATTACATATCTTTGGCGGATTCATTGTATAGATTATTATGGCATGATTGAGACTAACGAGGCCAAGGGTTTTAGGCATGTGAGACCAGAAGGAGCAGGGCATGAAGAAACAAGTAAATCAGGGTCTGAATGGGAGAAGAAACTAGATTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCCTTGGAATTAATGACTGCCAAGGAGAAGATAGATGCTGCAGCAGTGGATATGTTGGATCCATATGTTAGAAAAATAAGGGATGAAAAGTATGGATGGAAGTATGGTTGCGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCGGCTGAATTTGTGCACAAACATCTGAAGCTAAAACACCCGGAGCTTTTGATGGAACTAACATCAAAATTGCGTGAGGATCTTTACTTTCAAAATTACATGAATGATCCCGATGCTCCTGGTGGAACGCCTGTCATGCAGCAACCTCAGGACAAGCCTCTAAAGCGAAGATTAGGTCTGGAAGGCCGATTGAAAGATGATCGTGGTAATCGGCGGGACCAGGATAGGAGTGACAGAATAAATGGAGATAGGCTTGACAATTCCCCATCCCGTGAAAGGCACATGGGAAACCATGATGAAGCAATGTATGATGCATATGGAGGGCCTGCTGTTCCTCCATTCACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCGGAAGTTGCAATGCAGATGTTAAGGGAGCAAGGAGGGCCATCTTCATACGATGCCTCGGGAAGGAAGATGCGATCTGGTCCTCACATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTTAGACCTGATCCTCGACGGATGCGCAGTTATCAAGATCTGGATGCCCCGGAAGACGAAGTCACCGTGATAGACTATCGGAGCTTGTAG 2175 0.4869 MAEVINMPPDSIDQSPSASAPPPPPAAPPVAVDDDLPPPPLPPPSRRRDRRDDRDFDRHPNRSRGSDYSDRNVSPRDRDRDFKRRRSPSPGYRDRRYSPPPPPSRRSPPPYKRPRRGSPRGGGGGYGPDESRFGYDYFGGYERGMGGRPGHTDEKSYGRFAHRSAGGYQNGISDVDMNRGYANLPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLNLNPGLNSSSSSKSGQASEPNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHHISSEPRRIQADIQQAQAVVRKLDMEKGIEDNILCISDHNKNDDKAHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHCIDYYGMIETNEAKGFRHVRPEGAGHEETSKSGSEWEKKLDSFWQGRLNGQDPLELMTAKEKIDAAAVDMLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELLMELTSKLREDLYFQNYMNDPDAPGGTPVMQQPQDKPLKRRLGLEGRLKDDRGNRRDQDRSDRINGDRLDNSPSRERHMGNHDEAMYDAYGGPAVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDASGRKMRSGPHMGGPAPIIAVPPAFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4557g00003 724 Pfam SERRATE/Ars2, N-terminal domain 198 280 IPR021933 -
Gabi4557g00003 724 PANTHER ARSENITE-RESISTANCE PROTEIN 2 45 722 IPR039727 GO:0006397
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 1 135 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 94 108 - -
Gabi4557g00003 724 Pfam Arsenite-resistance protein 2 441 620 IPR007042 -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 280 301 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 302 319 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 566 612 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 544 613 - -
Gabi4557g00003 724 ProSitePatterns Zinc finger C2H2 type domain signature. 502 525 IPR013087 -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 15 43 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 44 92 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 665 709 - -
Gabi4557g00003 724 MobiDBLite consensus disorder prediction 280 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4557g00003 Gabi-Chr4557 41481 53544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4557g00003 92 724 C2H2 Transcription Factor Family AT2G27100 64.067 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4557g00003 K27103 - gmx:100817569 1053.12