Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4552g00003 ATGAAAAAAAGAAGGGAGGAACAGTCAAAAGGAGTTCTGAGCTCTACTAATGATATGCTTTCCTGTTTGCTTGCATTAAGGGATGAAAATCATCAACCTCTAGCTGATGATGTAATTACTGACAATTTTATTTTTTTATTTGTTGCAAGTCATGACACTTCTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCAGAGGTTCACAATAAAGTTTTACAAGAACAAATGGAAATTATAAAGCAAAGGGAAAGAAGAGAAGACAGATTAACATGGGCAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAGGAAATGATGAGGATGATCCCTCCTTTATTTGGAAGCTTTAGAAAAGCACTTAAAGATACAAGCTACGAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCAGCATATGGAACCCACATGAACAATGATATATTCGAGAATCCAAACAAATTTGATCCATCTCGTTTTGAAAATCCAACCAAGCCAATACCACCCTTTACTTACCTTTCATTTGGTGCAGGGCTACATTACTGCATAGGAAACGAATTTGCCAGGGTTGAAACCTTGACTATTATTCATAACTTTGTAAAGATGTATGAATGGTCTCAAGTAAACGCAGAGGAAGCAATTACTCGTCAACCAATGCCATATCCATCCAAGGGTCTCCATATTAAGATCAAACCCAGATGTAATATGTCCTAA 735 0.3701 MKKRREEQSKGVLSSTNDMLSCLLALRDENHQPLADDVITDNFIFLFVASHDTSATLMSLMIWKLSRDPEVHNKVLQEQMEIIKQRERREDRLTWAEIQKMKYTWRVAQEMMRMIPPLFGSFRKALKDTSYEGYDIPKGWQVYWAAYGTHMNNDIFENPNKFDPSRFENPTKPIPPFTYLSFGAGLHYCIGNEFARVETLTIIHNFVKMYEWSQVNAEEAITRQPMPYPSKGLHIKIKPRCNMS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4552g00003 244 PRINTS B-class P450 signature 106 117 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS B-class P450 signature 151 166 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS B-class P450 signature 180 189 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS B-class P450 signature 123 150 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS B-class P450 signature 189 200 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 182 191 IPR017972 GO:0005506|GO:0016705
Gabi4552g00003 244 Pfam Cytochrome P450 2 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PANTHER CYTOCHROME P450 26 3 229 - -
Gabi4552g00003 244 SUPERFAMILY Cytochrome P450 2 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS P450 superfamily signature 180 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS P450 superfamily signature 106 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 PRINTS P450 superfamily signature 189 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4552g00003 244 Gene3D Cytochrome P450 1 240 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4552g00003 Gabi-Chr4552 78007 78937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4552g00003 14 215 Cytochrome P450 AT4G19230 42.574 3.73e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4552g00003 - - gmx:100790209 456.447