Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00088 ATGGCTGAATACCAAGGTTACATCCTACTTTTTATCATTTGGCTAGTCTCCATAATCCTTATTCGAGCTTTACTCAACAAAACAAAGAACAAAGCTCATCGACCACCAAGTCCACTAGCCATACCCATCATTGGACACCTCCACCTTCTTGCTCCAATACCTCACCAGGCTCTTCATAAGCTCTCAACCCGCTATGGACCCATAATGCACCTTTTCCTTGGTTCTGTCCCTTGTGTCGTTGCTTCCACACCAGAAGCTGCAAGAGAGTTCCTTAAAACTCACGAAAATAACTTCTCCAACCGTCCTCAAAGTTCTGCTGTTGATTATCTTACATATGGCTCCCAAGACTTCTCCTTCGCCCCATATGGACCTTATTGGAAATTCATGAAGAAAATATGCATGTCTGAACTTCTGGGTGGTCACACACTCAGCCAACTTCTTCCTGTGAGGAGAGAAGAAACAACCAGGTTTTTGAGACTTTTACTCAAGAAAGGGAACGCGGGTGAGGCCATTGAGGTTGGAGGAGAATTAATGACACTAGCGAATAACATTGTGTCAAGGATGATTATGAGCCAAACATGCATGGAAAATGAAGGTGAAGCTGAAGAGGTGAGGAAGTTGGTGCAAGACACCACGCATCTCACGGGGAAGTTTAATGTTTCCGACTTCATTTGGTTCTTTAAGAACTGGGATTTGCAGGGGTTCAGCAAAAGGCTCAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGGGTGATCAAGGAGCATGAAGAGGAAAGGAGAAAAAGAAAGGAACTAGGTGGAGGAGATGGTCAGATCAAGGATCTACTTGATATATTAATGGACATACTTGAAGATGAGAGCTCTGACATAAAATTGACAATAGAGAACTTAAAGGCCTTCATCTTGGATATATTTATGGCAGGAACTGACACTTCAGCCTTAACCACTGAATGGGCTCTGGCTGAATTGATTAACCACCCATATGTGATGGAGAGAGCAAGGAAAGAGATCAATGCTGTAATTGGAAATAGTAGAATAGTAGAAGAATCTGACCTTGTCAACCTTCCATACCTGCAAGCTATAGTTAAAGAAACACTGAGGATTCACCCCACAGGTCCATTAATTGTCAGAGAATCATCTGAAAGCTGCACTATCTGGGGCTATGAGATTCCATCAAAGACCCAGTTGTTTATTAATGTGTGGGCTATTGGCAGGGACCCCAATCACTGGGAGAACCCACTTGAGTTCAGACCAGAAAGGTTTATTAGTGAAGAGGGAAGTGGGAAGAGCCAATTAGATGTGAGGGGACAACATTTTCACCTAATTCCATTTGGGAGTGGAAGAAGAGGCTGTCCTGGAACCTCACTGGCTTTGCAGGTTGTGCAGACCAACCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTAGTGGAGGCAATGATACTGTTGACATGGAAGAGAAACCCGGGTTAACCCTTTCAAGAGCTCATCCCTTGATTTGTGTCCCAGTGCCTAGGCTTAATCCTTTTCCTCCCATGTGA 1548 0.4393 MAEYQGYILLFIIWLVSIILIRALLNKTKNKAHRPPSPLAIPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHENNFSNRPQSSAVDYLTYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLSQLLPVRREETTRFLRLLLKKGNAGEAIEVGGELMTLANNIVSRMIMSQTCMENEGEAEEVRKLVQDTTHLTGKFNVSDFIWFFKNWDLQGFSKRLKEIRDRFDTMMERVIKEHEEERRKRKELGGGDGQIKDLLDILMDILEDESSDIKLTIENLKAFILDIFMAGTDTSALTTEWALAELINHPYVMERARKEINAVIGNSRIVEESDLVNLPYLQAIVKETLRIHPTGPLIVRESSESCTIWGYEIPSKTQLFINVWAIGRDPNHWENPLEFRPERFISEEGSGKSQLDVRGQHFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVSGGNDTVDMEEKPGLTLSRAHPLICVPVPRLNPFPPM 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00088 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 502 - -
Gabi4543g00088 515 FunFam Cytochrome P450 family protein 26 503 - -
Gabi4543g00088 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Gabi4543g00088 515 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4543g00088 515 CDD CYP93 66 505 - -
Gabi4543g00088 515 Gene3D Cytochrome P450 19 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00088 Gabi-Chr4543 873750 875667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00088 1 508 Cytochrome P450 AT5G06900 50.196 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00088 K24188 - gmx:100779342 879.396