Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00070 ATGGTTTTCGACTTCCTCTATGTGCATCTCAACCTCGTTTTCTTCTCTTCTATTTTGATTTCTCAGTGCTTGGCGTTCACTCATCCATCTGAAGTCTGGGCTCTCCAGGATCTATACAGGGCCTTAAACTACCCATCAGTGCTCCAAGGATGGAATGGAAGCGATCCTTGTGAGGAGTATTGGACAGGAGTTGTTTGTTCTGGGGCATCAGTTGAACATTTAAAAATTCAAGGATTAAACCTCACTGGGTGTTTTGGAAGCATGCTCTATAATCTACATAAATTGAAGGAACTTGATGTCAGTTCTAATAACATAATGGGCGAAATACCATTCAGTTTACCCCCCAATGCCACACATATGAATTTAAGCCACAATTTCTTAAATGGACCCATTGGTGATGTATTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTCTCGGGAGATCTACCAAGTTCATTTGGTTCCTTAACAAACCTTGCTAGATTGTTCCTGCATAATAACAGATTCACTGGATCAGTTGCCTACCTGGCTGAACTTCCACTTATAGATTTGAACATTCAAGATAATCTGTTTAGTGGCATTCTTCCACAGCGTTTTCAGTCCATACCGAATTTATGGATTGGAGGGAACAAATTCTATACAGCAGATTACTCTCCTCCCTGGACTTTTCCTTTGGACACTGTACCAGTTGAGCATAATATCAGTCGCCCACCCACAACACAGGCAAATGCCATCAAGAACTATGCTCCTCCTAAAGTGAGTGAGTACAAGAAGAAACATATAGGCCCTGGAGGAATAGCTTTTATGGTTGGTGGAGGAACAATAATGGCCACAGGTGTGGCACTCGTTGTTGCAATCCGTTTGAATAAACTGCGTGCACAGAGCCCGAACTTGAAGAGCTCGGAAAGCAACCATTGCTCTTTGCATTCTCATCCGACCAGTGCAACCATAGAGGTCTCTTCTACAGCAATAGATGACAGCCCACAAATCCCATCTTTTAATGCAGCATCCCTTTTGAGTCCAATGCTATGGCCTTCCCTGCAACATAACAATGCAGAGGAAGCATCAAGAAGAAGTTTTTCCATAGGAGGCAAATCCACTGGAAGGACGAAAATTTACACAGTAGCCGAGCTTCAGTTGGCTACTAGCTGCTTCAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGCCCTGTATACAGAGCTGGATTTCCGGATGGCAAAATTTTGGCCGTGAAGAATATAAACATGGCGGGCCAGTCCTTCAGAAAAGAGGAAAAGTTTTTGGATGTCATTTGCACGGCTTCGCGACTGAAGCACCCCAACATCGTAGCACTCAATGGTTACTGTCTGGAGCGCGGAAACCATCTTCTTGTTTACGATTACGTCAGAAATTTAACTCTAAACGATGCTCTTCACAGTGAAACATACAAACCTCTATCGTGGATCCACCGTCTCCAGATTGCTGTAGGTGTTGCTCAGGCTCTGGACTATTTGCACTCAGCCTGCCCTCCTGTGGCCCACGGAAACTTGAAGGCTGCCAATGTTCTACTGGACGAAAATTTGATGCCTCGTGTTAGTGACTGTGGCTTGGCTATTTTAAGACCACTGAGGAGCAATCAAGTTAAAATTCCAGCTACTGAGATTATTCTTGGAGAGAGAGGCTACGCTGCACCTGACCATGGCCAACCAGGAACCAGCAGCAGAAAGAGAGACGTCTATGCCTTTGGGGTATTGCTTCTGGAAATGTTAACAGGAAGGAAACCTTTCGATGGTTCCAAGCCAAGGGAGGAGCAATATCTGGCGAAATGGGCTTCATCTAGGCTTCAAGATAGCGCGAGTTTGGAACAGATGGTGGATCCCAATATGAAAAGGACATTTTCATCCAAGGCCCTTTCTCGTTATGCTAAAATCATCTCCCTCTGTATACAGCCTGTAAGGCAGTTCCGTCCTCCAATGTCTGAAGTTGTGGAGTCTCTTGTATCTTTTTCGCAAAAGTTCAACACTGCAAAGAGCCGTGTAGCAGATGGTTCTGAACTTGATCCATTGGAGAGGTCTTTTCGTTCAACCAACACACGCTTTATTGGTTCACCGGCATTGAGCCGCCATGTATCACCATGA 2139 0.4451 MVFDFLYVHLNLVFFSSILISQCLAFTHPSEVWALQDLYRALNYPSVLQGWNGSDPCEEYWTGVVCSGASVEHLKIQGLNLTGCFGSMLYNLHKLKELDVSSNNIMGEIPFSLPPNATHMNLSHNFLNGPIGDVFTGLDNLKEMDLSYNNFSGDLPSSFGSLTNLARLFLHNNRFTGSVAYLAELPLIDLNIQDNLFSGILPQRFQSIPNLWIGGNKFYTADYSPPWTFPLDTVPVEHNISRPPTTQANAIKNYAPPKVSEYKKKHIGPGGIAFMVGGGTIMATGVALVVAIRLNKLRAQSPNLKSSESNHCSLHSHPTSATIEVSSTAIDDSPQIPSFNAASLLSPMLWPSLQHNNAEEASRRSFSIGGKSTGRTKIYTVAELQLATSCFNEGNLLGEGSLGPVYRAGFPDGKILAVKNINMAGQSFRKEEKFLDVICTASRLKHPNIVALNGYCLERGNHLLVYDYVRNLTLNDALHSETYKPLSWIHRLQIAVGVAQALDYLHSACPPVAHGNLKAANVLLDENLMPRVSDCGLAILRPLRSNQVKIPATEIILGERGYAAPDHGQPGTSSRKRDVYAFGVLLLEMLTGRKPFDGSKPREEQYLAKWASSRLQDSASLEQMVDPNMKRTFSSKALSRYAKIISLCIQPVRQFRPPMSEVVESLVSFSQKFNTAKSRVADGSELDPLERSFRSTNTRFIGSPALSRHVSP 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00070 712 ProSiteProfiles Protein kinase domain profile. 391 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4543g00070 712 Gene3D Ribonuclease Inhibitor 26 243 IPR032675 -
Gabi4543g00070 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 670 IPR046959 -
Gabi4543g00070 712 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 116 229 - -
Gabi4543g00070 712 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Gabi4543g00070 712 Pfam Protein kinase domain 392 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4543g00070 712 SUPERFAMILY Protein kinase-like (PK-like) 375 664 IPR011009 -
Gabi4543g00070 712 FunFam Leucine-rich repeat receptor-like protein kinase 469 677 - -
Gabi4543g00070 712 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Gabi4543g00070 712 Gene3D Phosphorylase Kinase; domain 1 353 468 - -
Gabi4543g00070 712 Gene3D Transferase(Phosphotransferase) domain 1 470 687 - -
Gabi4543g00070 712 SUPERFAMILY L domain-like 27 212 - -
Gabi4543g00070 712 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 356 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00070 Gabi-Chr4543 726102 730991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00070 11 707 Strubbelig Receptor Gene Family AT5G06820 52.033 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi4543g00070 Pkinase 5.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00070 - - gmx:100775254 1058.51