Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00067 ATGATTATCCACTTTCGAAAACTGAGATTAACGTCGACACTTTCCAATGTTGCCCGAAACAACCTTAACCTTAAACCCTCAGAAAACCCTAGATTCCAGAACACGAAAAGAGCACTTCAATCGGACGCGAAACTCCCTCGAAAAGCGATCATGAAAGAAGCCCAAGCTGCATTGCTGGAGTATCTGCATTCCACGAGGAGCTTGCAGTTCTTGGACGCCGACAACATGTGCAAAAACTCGCCTTTTTTCCTTCAAGACCTTCTCCGCAAAATTCAAAAGAACCACGATGATGGGGACATGAAACGATCCATTTCCCGCTACCTGCGTTACCACCCCATCAACGAGTTCGAACCCTTTTTCGAAAGTGTGGGTTTGAAGCCTTCCGAATACGCGCCCCTTCTTCCCCGAGGCATGATTTTCCTCAACGATGACCATTTACTGATGGATAATTATCACACTCTCTGTAACTATGGTGTTCCCCGTTCCAAGATGGGGAAGATTTTTAATGATGCACCTCAAGTTTTTCGTTATGATAATAGGGTTTTGCAGTCAAAGCTTGAGGCTTATGAAAAGCTGGGTGTTGCATCATCTATTTTGGTTAAAGCTATTGCTTCTAGCCCCTTCCTTTTGGTTGGGGATGTTAACCTTGGTTTTGTCAAGGTTGTGGAGAAGTTGAAGCATCTTGTTGTTGCAAAGGATGATAGTTGGATTGAGGGGCATTTGTTGGATGGGGTTTCTTTTAATTGGGGCATGATGCTTGAGCTCTTGTCCTTGCTTGGCAAGGTTTATAGGAAGGGACAGTTGGCTGACCTGATTAGCCGGCACCCTTGTGTTGTTTTTGAGGATTCAGGAGGTAGGACACTATCCCTGATTGGCTTCTTGTTCAAATTTGGATTGTCTCTGAACCAGATATCTCTCATTTTTCTTGAGTTACCGCAGATTCAGATTGGCAAGTTCTTCTCCAACTTGAGGCATTGTTTTCTGTTCCTGAGTGAAATTGAGATGCAGGCTGCAGAGATTGGAAGGATTTTCCAATCTCACTCCTTGCTGCTTGGCTCCTCCACTCTAAAGAAAACAACTAGTTTACTTGGTAACTTGAATGTTGGCAAGAAACGGCTCTGTAGAATCATACAGGATAATCCTCAAGAAATGAAGAATTGGGTTCTGGGAAAAAAACTTCAACCTTTGGAGAACTCCAACGAAGAGCAAGAATCAAAGATGCTGAAGACAGAGTTCTTGTTGAGCTTGGGATATGTAGAAAACTCGAAAAACATGGAGGAGGCATTTAAGCTGTTCAGAGGTAAGGGAGCTGAGCTTCAGGAGAGATTCGATTTTTTTGTTAAAGCTGGCTTTGATTGTGAGGATGTTCGTAAAATGATTAGAGTTGCCCCTCAGATTCTTAATCAGACCACAGATAGGATCAACATGAAAATTGAGTATCTTGTAAATGAAGGATATCCTATATCAACTTTAGTGAGCTTCCCATCTTTTCTTTCCTACACACCTCAAAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTCCAAGACCATGGAGCTGCAGATCCCGGGCTTGCTTTGAGCACTCTAATTGCATGCTCAGAGAAAATATTCGTATCACAGTATGTAAAGCGTCATCCATCTGGCCCTAAAGTTTGGAAGGATTTAAAGACAGAAATTTATTCTGAGGATTAA 1695 0.4242 MIIHFRKLRLTSTLSNVARNNLNLKPSENPRFQNTKRALQSDAKLPRKAIMKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQDLLRKIQKNHDDGDMKRSISRYLRYHPINEFEPFFESVGLKPSEYAPLLPRGMIFLNDDHLLMDNYHTLCNYGVPRSKMGKIFNDAPQVFRYDNRVLQSKLEAYEKLGVASSILVKAIASSPFLLVGDVNLGFVKVVEKLKHLVVAKDDSWIEGHLLDGVSFNWGMMLELLSLLGKVYRKGQLADLISRHPCVVFEDSGGRTLSLIGFLFKFGLSLNQISLIFLELPQIQIGKFFSNLRHCFLFLSEIEMQAAEIGRIFQSHSLLLGSSTLKKTTSLLGNLNVGKKRLCRIIQDNPQEMKNWVLGKKLQPLENSNEEQESKMLKTEFLLSLGYVENSKNMEEAFKLFRGKGAELQERFDFFVKAGFDCEDVRKMIRVAPQILNQTTDRINMKIEYLVNEGYPISTLVSFPSFLSYTPQRVKLRLSMYNWLQDHGAADPGLALSTLIACSEKIFVSQYVKRHPSGPKVWKDLKTEIYSED 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00067 564 Gene3D Transcription termination factor 3, mitochondrial 99 234 IPR038538 -
Gabi4543g00067 564 Gene3D Transcription termination factor 3, mitochondrial 286 555 IPR038538 -
Gabi4543g00067 564 SMART mt_12 488 521 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 SMART mt_12 457 487 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 SMART mt_12 341 369 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 SMART mt_12 165 195 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 SMART mt_12 200 231 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 FunFam Transcription termination factor MTEF18, mitochondrial 290 556 - -
Gabi4543g00067 564 Pfam mTERF 263 413 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 Pfam mTERF 436 538 IPR003690 GO:0003690|GO:0006355
Gabi4543g00067 564 PANTHER CGI-12 PROTEIN-RELATED 264 546 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00067 Gabi-Chr4543 709032 711650 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi4543g00067 mTERF 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00067 - - lja:Lj1g3v4317450.1 712.99