Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00065 ATGTACCAGTGTGCTTCCCAGATGTATGGAACTCAATGGGAATCCCATATGGGGTTTAGCAACCTAGCCAAGGTTGTTGGATCAGAACAATCACCCTGTAACATTGTGACCACTCCTTTTCAAACAACGCAAGGTTTCTGTGCAAATGCAGCCAAAAGCCTTGTGAGCTTTCAAACTCAAGAACATGATCAGCATCAGATTGAAGTTCCTGCTTGGTGCTTTGAGTTTCCAAATACAACAGACTCCCCCATGTTGATTTGCCAAGCCTCTGGGAATAACTTCGCCAATACCACCAAACAAGATCGATTCACCTCTCAATTCACAAGCTCATTGTACTCGAATGCTGACTCTTTCTTGGCTAGCTGTGCAGATAGCCTTTCTTCTTCTGAAAAATATAGTAATTTTCAGCCTGACAATATGCCATTTTATGAAAACTTTCCACAAGAACGTGATAATGATGCTGCCACAGATGAGAGGCCCCATGAAATTTCCTTCCAGAGAAATCAGTTGGCCTCATGTGCAAAGCCAGAAAAAGATACTCCTCGAATTTGTGGGGTTGCCGGTGCCAATTCTAGCAACTCTGCTTCTAAGAGAGCTCTAACACGTAAAAGAAGAATAAGATGGACCAAAGATTTGCATGAGCCATTTATGATGATTGTTAATAGCCTTGGAGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCGGATTTACTGTCCATTTCTCACGTTAAAAGTCATTTGCAGGTAAAACTATTTCCAGTGAACAAGTGCTATGTCAAATGTAGGTCTACAAATACAATACAGATGCACAAAGCTTTGCAGGAAGGACCCGAGGAAGGACATAGAACAGATGGGGTCACTGAACTTCAAGTAAAAATCCATATGCAAATTGAGGAATCACAGAAACTGCAACTAGAGGTCCAGAGGAGCATTGACCAACAATTAGAGATGCAACGAGATTTGCAAATGCTAATTGAACAGCAGAACAAGCTGCTCAAAAGTAATCTAAGATCACCAAAAAATGAAAGAACCAAAAGGTAG 1056 0.4119 MYQCASQMYGTQWESHMGFSNLAKVVGSEQSPCNIVTTPFQTTQGFCANAAKSLVSFQTQEHDQHQIEVPAWCFEFPNTTDSPMLICQASGNNFANTTKQDRFTSQFTSSLYSNADSFLASCADSLSSSEKYSNFQPDNMPFYENFPQERDNDAATDERPHEISFQRNQLASCAKPEKDTPRICGVAGANSSNSASKRALTRKRRIRWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQVKLFPVNKCYVKCRSTNTIQMHKALQEGPEEGHRTDGVTELQVKIHMQIEESQKLQLEVQRSIDQQLEMQRDLQMLIEQQNKLLKSNLRSPKNERTKR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00065 351 Pfam MYB-CC type transfactor, LHEQLE motif 300 339 IPR025756 -
Gabi4543g00065 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 201 343 IPR044848 GO:0003700
Gabi4543g00065 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 254 IPR006447 GO:0003677
Gabi4543g00065 351 Gene3D - 202 257 - -
Gabi4543g00065 351 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00065 Gabi-Chr4543 690813 693395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00065 191 338 G2-like Transcription Factor Family AT4G28610 40.541 4.08e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4543g00065 Myb_CC_LHEQLE 7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00065 - - gmx:102662952 412.149