Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00064 ATGGAGGATTTGCAGAAGAGAAAGCTAGAAGATGAAGAGGAAGACGCAGAGGCAGAGGCAGAGGCAGAGGCAGGCAACGCTGATTTTGTTTCCAAGGAAGAGACACGCTTTCTCATTGAACCTCTACCTATACCGAGGAACTCATTAATTCCTAACAAAGGAAATCAGGAGATTCAGGACCATACAGTTGCTCGTGACTCAATTGCTGAGTTGAGCTTCTCTTCTCAGCAAGAGAAGTTGTCTCCAACATTTTCAGCAGGAAGTGTGTCAAATACTCTTGGAAACTTTTCTCCTAATGGGACAATAGTCTCAAGTAAAACACGTATAAGATGGACTACCGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGGGGTGCTGATAAGGCAACACCAAAAGACATATTAAAGATTATGGACTCGGATGGGTTGACCATCTTCCATGTCAAAAGTCATTTGCAGAAATATAGAATTGCAAAATTCATGGCAGATTCAGCTCAAGGGAAATCTGACAAAAGAATCCATACAGAGGATGTGCATCATCTTGATGTCAAAATTGGCTTGCAAATTACAGAGGCACTTCAGCTGGAATTAGATGCTCAAAGTTATCTTCATGAACAGCTTGAGATTCAGAGAAAATTACAGTTGCTAATTGAAGAACAAGGTAGGCAGCTGAAAAAAATGTTTGACCAGCAGCAGAAAAGTAATAACCTCTTGAATACTCAGAATACAACCAATGATGATACAGCAATTAGTCATAAGGATGTTGAGGTTTCTTTTTCTGGAGGTGTGGGAAATTACTTCTTCCCTTCCAAGGCCTCTTCAAGCCCATAA 840 0.4083 MEDLQKRKLEDEEEDAEAEAEAEAGNADFVSKEETRFLIEPLPIPRNSLIPNKGNQEIQDHTVARDSIAELSFSSQQEKLSPTFSAGSVSNTLGNFSPNGTIVSSKTRIRWTTDLHEKFVECVNRLGGADKATPKDILKIMDSDGLTIFHVKSHLQKYRIAKFMADSAQGKSDKRIHTEDVHHLDVKIGLQITEALQLELDAQSYLHEQLEIQRKLQLLIEEQGRQLKKMFDQQQKXSNNLLNTQNTTNDDTAISHKDVEVSFSGGVGNYFFPSKASSSP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00064 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 93 247 IPR044848 GO:0003700
Gabi4543g00064 280 Pfam Myb-like DNA-binding domain 110 159 IPR001005 -
Gabi4543g00064 280 Coils Coil 1 26 - -
Gabi4543g00064 280 Gene3D - 105 164 - -
Gabi4543g00064 280 MobiDBLite consensus disorder prediction 1 29 - -
Gabi4543g00064 280 Pfam MYB-CC type transfactor, LHEQLE motif 190 236 IPR025756 -
Gabi4543g00064 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 163 IPR017930 -
Gabi4543g00064 280 FunFam Myb family transcription factor 105 163 - -
Gabi4543g00064 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 106 161 IPR006447 GO:0003677
Gabi4543g00064 280 SUPERFAMILY Homeodomain-like 104 160 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00064 Gabi-Chr4543 680865 683533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00064 97 240 G2-like Transcription Factor Family AT3G04450 50.676 3.80e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4543g00064 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00064 - - gmx:100527257 299.286