Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00047 ATGAGGATCCGGAAAAGACAGGTGCTTTTCCCTTCATCTCTCTCGCCGTTGCCTCTCTCAGATCCCCACCTGATCAACCGGTCACCGGTGATGGTGCAACTCGGCGATGCTACATCCACTGTACCGAAATCTTCTTCCACACCACTACTCCCACAACATGCTGCTGCTGCTGCTGCAGCACCAGCTTCAAGCTTGGATCATCATCAGCCGTCTGATCAGCCACTCCCACCGATCGGGAAACTAAGCAACGGCTGGGATCATCGCTTCGGCATCGGTGGTGACAGTGGGGCATACCGACAGCACAACAAGCAAGACCCTTTGGACGAGGATGTTAGAGGGCAAGAGAGTGAAGACTCTAGAGAGAAGGATAATAATCATGCCAGGAAAGGACGAGTCTTGGGTTCGGAGGTTTTGCTACCTGCAAGTCCTTCTTCTACTCAAGATGGAAGATGGTGCAATGCAGAGAAAGCGATTCCACTTAAGAAACGGAGAGGGAGCTTCGAGAATGGGACGGTGAATAATAATTATAATAGTAAGAAGATGAAGGCGAGGATGAAGACGAAGATGAACAAGAAGTGTTCTACGAGAAATGATGATTATAACATGGAACACGAAGACGAGGATGAGGATGAGGATGAGGAGGAGGAAGAAGAAGCGGAAACAAAAAAAGAAGTGAGTGTAATTAGTAAGAGGAGGGCAAGGGGTAGTGCACTCATGGAAGGGTCACGGTGCAGTCGTGTGAATGGGAGAGGATGGAGGTGCTGTCAGCAAACACTGGTTGGTTACTCGCTGTGTGAACATCACTTGGGGAAAGGAAGGCTCAGAAGCATGACAAGTGTTAGAAGCCGATCCATTGTCTCAACTACGATTGCACCAAAGAAGTTGCACGACCACCCTTCTGTATCTGCTGCATCATCTTCTTCTTCTTCTCTTGGAAAGCAAACCAATAAGTGTGTTACTGATGAGAAGAAGATCAATAAGCCTTTGATAATCACGAAGAAGAGGATGAAGCTTGGAATGGTGAAAGCACGATCTATGAGCAGCTTGCTGGGACAAACTAGCACCCAGGTTACTTTAGCTCATGAGAATAACAAGTAA 1098 0.4772 MRIRKRQVLFPSSLSPLPLSDPHLINRSPVMVQLGDATSTVPKSSSTPLLPQHAAAAAAAPASSLDHHQPSDQPLPPIGKLSNGWDHRFGIGGDSGAYRQHNKQDPLDEDVRGQESEDSREKDNNHARKGRVLGSEVLLPASPSSTQDGRWCNAEKAIPLKKRRGSFENGTVNNNYNSKKMKARMKTKMNKKCSTRNDDYNMEHEDEDEDEDEEEEEEAETKKEVSVISKRRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIVSTTIAPKKLHDHPSVSAASSSSSSLGKQTNKCVTDEKKINKPLIITKKRMKLGMVKARSMSSLLGQTSTQVTLAHENNK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00047 365 Coils Coil 197 224 - -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 182 228 - -
Gabi4543g00047 365 Pfam WRC 240 280 IPR014977 -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 37 51 - -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 295 317 - -
Gabi4543g00047 365 PANTHER EXPRESSED PROTEIN-RELATED 114 350 - -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 101 130 - -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 202 220 - -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 37 150 - -
Gabi4543g00047 365 ProSiteProfiles WRC domain profile. 238 282 IPR014977 -
Gabi4543g00047 365 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00047 Gabi-Chr4543 469981 472347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00047 235 289 GRF Transcription Factor Family AT2G36400 38.596 4.27e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4543g00047 - - gmx:100810559 414.461