Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00012 ATGGACAACACTAATGAGAAAGAGACACATGACTTCATGAATGTTGATTCTTTCTCTCAGCTCCCCTTCATCCGCCCTCCACCACCTACTAAAGAAAAGGCCATTCGACTCTTCGGCATAGAATTCGCCGACGCCCCTACCGCCGCCGATGAGTCCGAATCCACCGACACAACAACCAACAACAACAACAATGCTCTCGAGCTTGATAGCAATAATAACAAGGAGAACAACACAGAGAATGGCGAGAGTAGCCGCAGATTTGAATGCCATTACTGTTGTAGAAACTTCCCCACTTCTCAGGCCTTGGGTGGGCACCAAAACGCTCACAAACGAGAACGGCAACACAAGAAACGAGCACAAATCCAATCAGCTATGGTTCATAGTACCCTCTCTGATGATAGGGTTTATGGCCTCATGAACTACAGGTTCGGTTCTGCTCCAACATGGAATAGCAACTCTTCTTCAAGTGCTATGATCCGTGGTGGTGGTGGAAGGTTCTATGGAAGCAATATTGGCCGTGGAAGCAACTATTCTTATCAACAACAACCCATCAATGGAAGCCCCTTGCCCTTGTGGCGAGTCACCACAGCCACCACCGGTCATGTCCAAAGTAACCCTATCTTCAACCGTGAACCCTCGTTACATCCATTGCCTTTGTTTGCTGGCGAGGAAGTGAACACCAGGATGGGGCCCACACGGGTTGGTACCTCTGGTTCACAAAACCGGTATGGTTATGACTCAAAACCAAGCGTCAACGACCATGTGAGTTTGGATCTTCATCTGTAA 786 0.4835 MDNTNEKETHDFMNVDSFSQLPFIRPPPPTKEKAIRLFGIEFADAPTAADESESTDTTTNNNNNALELDSNNNKENNTENGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHKKRAQIQSAMVHSTLSDDRVYGLMNYRFGSAPTWNSNSSSSAMIRGGGGRFYGSNIGRGSNYSYQQQPINGSPLPLWRVTTATTGHVQSNPIFNREPSLHPLPLFAGEEVNTRMGPTRVGTSGSQNRYGYDSKPSVNDHVSLDLHL 261
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00012 261 Gene3D Classic Zinc Finger 56 135 - -
Gabi4543g00012 261 MobiDBLite consensus disorder prediction 50 78 - -
Gabi4543g00012 261 SUPERFAMILY beta-beta-alpha zinc fingers 84 115 IPR036236 -
Gabi4543g00012 261 PANTHER ZINC FINGER PROTEIN GIS 1 261 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Gabi4543g00012 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Gabi4543g00012 261 MobiDBLite consensus disorder prediction 228 250 - -
Gabi4543g00012 261 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Gabi4543g00012 261 MobiDBLite consensus disorder prediction 46 82 - -
Gabi4543g00012 261 MobiDBLite consensus disorder prediction 230 247 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4543g00012 Gabi-Chr4543 172851 173636 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00012 4 261 C2H2 Transcription Factor Family AT3G58070 41.636 5.11e-47 155