Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4543g00012 | ATGGACAACACTAATGAGAAAGAGACACATGACTTCATGAATGTTGATTCTTTCTCTCAGCTCCCCTTCATCCGCCCTCCACCACCTACTAAAGAAAAGGCCATTCGACTCTTCGGCATAGAATTCGCCGACGCCCCTACCGCCGCCGATGAGTCCGAATCCACCGACACAACAACCAACAACAACAACAATGCTCTCGAGCTTGATAGCAATAATAACAAGGAGAACAACACAGAGAATGGCGAGAGTAGCCGCAGATTTGAATGCCATTACTGTTGTAGAAACTTCCCCACTTCTCAGGCCTTGGGTGGGCACCAAAACGCTCACAAACGAGAACGGCAACACAAGAAACGAGCACAAATCCAATCAGCTATGGTTCATAGTACCCTCTCTGATGATAGGGTTTATGGCCTCATGAACTACAGGTTCGGTTCTGCTCCAACATGGAATAGCAACTCTTCTTCAAGTGCTATGATCCGTGGTGGTGGTGGAAGGTTCTATGGAAGCAATATTGGCCGTGGAAGCAACTATTCTTATCAACAACAACCCATCAATGGAAGCCCCTTGCCCTTGTGGCGAGTCACCACAGCCACCACCGGTCATGTCCAAAGTAACCCTATCTTCAACCGTGAACCCTCGTTACATCCATTGCCTTTGTTTGCTGGCGAGGAAGTGAACACCAGGATGGGGCCCACACGGGTTGGTACCTCTGGTTCACAAAACCGGTATGGTTATGACTCAAAACCAAGCGTCAACGACCATGTGAGTTTGGATCTTCATCTGTAA | 786 | 0.4835 | MDNTNEKETHDFMNVDSFSQLPFIRPPPPTKEKAIRLFGIEFADAPTAADESESTDTTTNNNNNALELDSNNNKENNTENGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHKKRAQIQSAMVHSTLSDDRVYGLMNYRFGSAPTWNSNSSSSAMIRGGGGRFYGSNIGRGSNYSYQQQPINGSPLPLWRVTTATTGHVQSNPIFNREPSLHPLPLFAGEEVNTRMGPTRVGTSGSQNRYGYDSKPSVNDHVSLDLHL | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4543g00012 | 261 | Gene3D | Classic Zinc Finger | 56 | 135 | - | - | |
Gabi4543g00012 | 261 | MobiDBLite | consensus disorder prediction | 50 | 78 | - | - | |
Gabi4543g00012 | 261 | SUPERFAMILY | beta-beta-alpha zinc fingers | 84 | 115 | IPR036236 | - | |
Gabi4543g00012 | 261 | PANTHER | ZINC FINGER PROTEIN GIS | 1 | 261 | IPR044291 | GO:0003700|GO:0009739|GO:0010026|GO:0010090 | |
Gabi4543g00012 | 261 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 87 | 114 | IPR013087 | - | |
Gabi4543g00012 | 261 | MobiDBLite | consensus disorder prediction | 228 | 250 | - | - | |
Gabi4543g00012 | 261 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 89 | 109 | IPR013087 | - | |
Gabi4543g00012 | 261 | MobiDBLite | consensus disorder prediction | 46 | 82 | - | - | |
Gabi4543g00012 | 261 | MobiDBLite | consensus disorder prediction | 230 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4543g00012 | Gabi-Chr4543 | 172851 | 173636 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4543g00012 | 4 | 261 | C2H2 Transcription Factor Family | AT3G58070 | 41.636 | 5.11e-47 | 155 |