Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4543g00003 ATGGAATCTCAGCTGCGTGAAATAACCTCACTTCTAGAATTGGAATCAGACGAGAGAACCATCATGTTAGGGATTTGGGGAATGAGTGGAGTAGGAAAAACAACACTTGCCCGAGCTGTACATAATTCGATTTCAGACCAGTTTGAAGGTTTGTGTTTTCTTGCTGATGTTAGACAGAAATCACATGACCTTGGCATAGTGACGTTGCAGGAGACACTACTTTGCGAAATCGTTGAGGAGAAGGACAACAAGTTTGCTGATGTAAGTGAAATAATTCCATTACTAAGACAAAGGTTCCACCGAAAGAAGATTCTTTTGATTCTTGACGATGTTAGCGAACCGGAGCAGTTAAAGTCATTAGCTGGAGGATGTGATTGGTTTGGTTCTGGCAGCAGAGTCATTATAACAACAAGGGATCGGCGTTTGCTTTTAGACCATGGCGTTGATAGAGAATATGCACTCGACCCATTAGATGAAGAAGAAGCTCTTGAGTTGTTTTGTTGGAAGGCCTTTGAAAATAAAGAACCTGATCCAGTTTACATGAACCTATCTAAACAAGTAGTACGCTATTCCAATGGAATTCCGTTGGTTTTGGAATTAATTGGCTCTTACTTGTTTGATAAGCTAATAGTTAAATGGAAATCTGTGTTGAAAACACACCGCAGATTTTCTACAATAGCGAACGGTTTGAATGACATGATTTTCTGGATCCTGAAGATCTGCTACGATAGTTTGGATGAAGATGTGAAAACAATTTTCCTTGACATTGCATGTTGCTTCCATGGTTACGAACTGGACCATGTTACTTATTTGCTCCTGAATGGTCGTGGTTTCCATCCAGGATATGGTTTGCAAGTGTTGATTTCAAAATCTTTCGTAAAGATCGATGGTGGTCTGGTAAAAGTGCATGACTTGATAAAAGACCTGGCTATCAAAATTTTTTATCAGGAATCACCTTCAGATCCTGGTAAACGTAGTAGATTATGGTACTATAAAGACGTTCTTAAGGTTTTGCGACAACGTACGGGAACTTCTTGCGTTGAAGTCTTGAAGATTGACTTGCCTAAAGGCGAAGAAGTGCATTGGGATGGAACTGGTTTCAAGAAGATGACAAACCTCAAAATTCTTGAAATTAGAAACGCGCGCTTTTCTGAAATCCCGAAGATTTTCCCAAATAATCTGAAGGTGCTGATCTGGAAAGGATGCTTCAACTGA 1215 0.3984 MESQLREITSLLELESDERTIMLGIWGMSGVGKTTLARAVHNSISDQFEGLCFLADVRQKSHDLGIVTLQETLLCEIVEEKDNKFADVSEIIPLLRQRFHRKKILLILDDVSEPEQLKSLAGGCDWFGSGSRVIITTRDRRLLLDHGVDREYALDPLDEEEALELFCWKAFENKEPDPVYMNLSKQVVRYSNGIPLVLELIGSYLFDKLIVKWKSVLKTHRRFSTIANGLNDMIFWILKICYDSLDEDVKTIFLDIACCFHGYELDHVTYLLLNGRGFHPGYGLQVLISKSFVKIDGGLVKVHDLIKDLAIKIFYQESPSDPGKRSRLWYYKDVLKVLRQRTGTSCVEVLKIDLPKGEEVHWDGTGFKKMTNLKILEIRNARFSEIPKIFPNNLKVLIWKGCFN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4543g00003 404 SUPERFAMILY "Winged helix" DNA-binding domain 234 338 IPR036390 -
Gabi4543g00003 404 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 402 IPR044974 GO:0006952
Gabi4543g00003 404 Pfam NB-ARC domain 4 243 IPR002182 GO:0043531
Gabi4543g00003 404 Gene3D - 156 246 IPR042197 -
Gabi4543g00003 404 PRINTS Disease resistance protein signature 368 384 - -
Gabi4543g00003 404 PRINTS Disease resistance protein signature 191 205 - -
Gabi4543g00003 404 PRINTS Disease resistance protein signature 22 37 - -
Gabi4543g00003 404 PRINTS Disease resistance protein signature 98 112 - -
Gabi4543g00003 404 Gene3D - 1 148 IPR027417 -
Gabi4543g00003 404 SMART AAA_5 19 158 IPR003593 GO:0016887
Gabi4543g00003 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4543g00003 Gabi-Chr4543 18747 20205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4543g00003 23 329 WRKY Transcription Factor Family AT5G45050 36.482 2.01e-51 184