Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4532g00005 ATGGAGGAGACACGAGAAGATGCAGGGCCGGCAGAGCAAGGTCAATCTAATGTATCGTGGTGGCCTTCTGATTTTGTTGAAAAATTTGGATCTGTTTCTTTGGGTTCTCAAGATGAGACCTTGAATAATGAAGAATCTCCTAGACATTCTCACAATGATGTTTTGTCACCTCAGAAAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTCTGAACCAATACCAAATGGATTTTATTCAGTCATTCCGGAGACCAGACTTAAGGAACTTTTTGATAGCATTCCTACCTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAGGGCTGACATCATTCTTGTGGATTCAGAGAAAGATAAAAAGCTATCCATGTTGAAGCAACTGATTGTGGCATTGGTTAAAGGATTAAACTCAAATCCAGCGGCGATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGATCCAATGTGGAAAGTCCAGCAAAAGTTGCATTAGATGAAACGTCTCACATCTTTGAGAATCGAGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGTGCTATCTTATTTAAAGTATTAGCTGATACTGTAGGTCTTGAAAGTATGCTCATGGTGGGCTTGCCAAATGATGTGGCTGTTGAATGTGTCGATTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGGTTTCCGGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCATATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCGCCATTAGAACCAAACAGTCCTTTATTTGGGGTTTCAGAAAGGTTAGATCCCAACAGTGCTGAGAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGCATCTCCAAATGTATCGGGCCTTTCCTTGAGAAATATGATGTTACGATCACATAGCAGTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACATAGGACAGCTAGTTCAAGTCCGGAACATCCATCATTTAGAGCACGTGCACGGTCCATGCTTAGTGGTGATAGAACAGCATTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGTTATAGGTCAGATGGTGCATCTTCGTTAGAAGCTCGTAGGATACGAAGAAGAAGCATCAGCATTACCCCAGAGATTGGTGATGACATCGTAAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAAAACCGTCTTCTGAGAGAACGAGGGGATGATAACTCATTCTCCCATTCTCCAAACAATAGAAGTAGTGATGCCAATCTTCAGAAAAATGTGTCAAATTTCGGTGTTCATGGTCATGATGAAAGGTCCGTCTTATATTCTCTTCAGCGTGACGAAGTAACTTCACAAAAGGCAATGTCATTACCGTCTTCACCGCATGATTATAGAGGTCATGCTTCTGAGAGCAGCGGGCCATCAAGATATGGAGTGAATGATGAAATGGAGTCGACTTGGAATAGAGTACTTGAATCTCAGATGTTCAATAATAAACCTCTGTTACCATTTGAAGAATGGAATATTGACTTCTCAGAATTAACTGTTGGCACTCGTGTAGGGATTGGGTTCTTTGGAGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTCAGTCGGCTCAGACATCCTAATGTTATCTTATTTCTTGGGGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACAGAATATATGGAAATGGGATCATTGTATTACTTGATACATTTGAGCGGTCAAAAGAAAAAGCTTAGTTGGCGGAGAAGACTTAGGATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACACCGTATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAATTGTCTAGTGAATAAGCATTGGACCGTGAAAATCTGTGATTTTGGGCTTTCAAGAATAATGACAGATTCTCCTGTGGGAGATCCTTCATCGGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATACGAAATGAACCATTCACCGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAGCTCTGCACCTTAAATAGACCATGGGAAGGCGTACCGCCTGAGAGGGTAGTTTATTCCGTTGCTAACGAGGGTTCCAGATTGGAGATTCCTGAAGGACCCCTAGGCAGGCTGATTTCAGACTGTTGGGCAGAATCACATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGATATCGAGTACTCATTGTGCTGA 2451 0.4223 MEETREDAGPAEQGQSNVSWWPSDFVEKFGSVSLGSQDETLNNEESPRHSHNDVLSPQKASQILWRTGMLSEPIPNGFYSVIPETRLKELFDSIPTLDELHALGGEGFRADIILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRSNVESPAKVALDETSHIFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESMLMVGLPNDVAVECVDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISAAGESDSAENDSCDSPLEPNSPLFGVSERLDPNSAEKEENLQFHRRFEASPNVSGLSLRNMMLRSHSSLSLSHSEPNIATAFGRRSRRKVIAEHRTASSSPEHPSFRARARSMLSGDRTAFRDFADDQATSRSSYRSDGASSLEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSFSHSPNNRSSDANLQKNVSNFGVHGHDERSVLYSLQRDEVTSQKAMSLPSSPHDYRGHASESSGPSRYGVNDEMESTWNRVLESQMFNNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTDSPVGDPSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 457 475 - -
Gabi4532g00005 816 Pfam Protein tyrosine and serine/threonine kinase 561 808 IPR001245 GO:0004672|GO:0006468
Gabi4532g00005 816 CDD STKc_MAP3K-like 566 808 - -
Gabi4532g00005 816 ProSitePatterns Protein kinases ATP-binding region signature. 566 587 IPR017441 GO:0005524
Gabi4532g00005 816 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 335 808 - -
Gabi4532g00005 816 SMART serkin_6 560 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4532g00005 816 ProSiteProfiles Protein kinase domain profile. 560 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 497 525 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 393 407 - -
Gabi4532g00005 816 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 444 476 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 272 296 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 36 57 - -
Gabi4532g00005 816 MobiDBLite consensus disorder prediction 391 410 - -
Gabi4532g00005 816 SUPERFAMILY Protein kinase-like (PK-like) 535 808 IPR011009 -
Gabi4532g00005 816 Gene3D Phosphorylase Kinase; domain 1 553 638 - -
Gabi4532g00005 816 Gene3D Transferase(Phosphotransferase) domain 1 639 814 - -
Gabi4532g00005 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Gabi4532g00005 816 FunFam Serine/threonine-protein kinase isoform 1 551 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4532g00005 Gabi-Chr4532 47507 76669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4532g00005 1 816 MAP Kinase Kinase Kinase AT3G58640 71.742 0.0 1204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gabi4532g00005 PK_Tyr_Ser-Thr 2.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4532g00005 - - gmx:100803469 1453.73