Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4532g00003 ATGGAATCCATCGCCGAGGCTCCGCCGCACGCCGTCACACCTCTGTCCTCGCGGCCGTCTCCGTCGCCGTTCCACGGTCGGGAAGACTGTTGGTCCGAGGAGGCCACGTTCACCCTCATCGACGCCTGGGGAGAGCGCCACCTGGAGCTCAGCCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACGCCCGACACGGCCGCGCCACGAAGGCGCGCCGCACCGACGTCCAGTGCAAAAACCGAATCGACACGCTTAAGAAGAAGTTCAAGATCGAGAAGGCCAGAGTTTTCGAATCCGACGATTACGCCACCGCGTGGCCGTATTTTCGCCGCCTCGATTTCCTTATCGGAGAAAATTTTCCGGCTAAGAAGCACTCGCCGCCGGCATCCGGAAGAGATCGCAGAAACTCCCCTCTGTTGAAGCCCCCAGCCTGGGCGATCGTGCCGGTCGGTCCTCGATCCGGCACTCAAAAGCGGCCGCCGCCGCCGGATACGGCGGTGACGGCGACGGCAACATCCCCGGCAAGCATGAAGAATTCATACTTTCACCGGAATTTCTCGGCTTTCGCGGCAGTGGCAGCTGCGGCGGCGGAGGCGGAGGAAGAGGAAGAGAGTGAGAATTGGAAGTGGAGGAGTGGGAGTGAGAGGAGGAAGCGGAAAAAGGATTATTGGGAAAATGGGTACAAGGTGGTTGCAGAGGCGATAGAGAAGTTTGGAGAAATATATGAGAGAGTGGAGACAGAGAAGCATAAGCAAATGGTGGAGTTGGAAAAACAGAGGATGCAATTTGCTAAGGATTTGGAATTGCAGAGAATGCAGCTCTTCATGGAAACGCAGCTTCAGCTCCAAAAAATCAACCGGTCCAAGCGTTCTTCTGAAGCTGACAGTTGCTGA 912 0.5779 MESIAEAPPHAVTPLSSRPSPSPFHGREDCWSEEATFTLIDAWGERHLELSRGNLRQKHWQEVADAVNARHGRATKARRTDVQCKNRIDTLKKKFKIEKARVFESDDYATAWPYFRRLDFLIGENFPAKKHSPPASGRDRRNSPLLKPPAWAIVPVGPRSGTQKRPPPPDTAVTATATSPASMKNSYFHRNFSAFAAVAAAAAEAEEEEESENWKWRSGSERRKRKKDYWENGYKVVAEAIEKFGEIYERVETEKHKQMVELEKQRMQFAKDLELQRMQLFMETQLQLQKINRSKRSSEADSC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4532g00003 303 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 295 IPR044823 -
Gabi4532g00003 303 MobiDBLite consensus disorder prediction 126 177 - -
Gabi4532g00003 303 Gene3D - 31 97 - -
Gabi4532g00003 303 Pfam Myb/SANT-like DNA-binding domain 28 120 IPR044822 -
Gabi4532g00003 303 MobiDBLite consensus disorder prediction 1 27 - -
Gabi4532g00003 303 FunFam trihelix transcription factor ASIL2 31 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4532g00003 Gabi-Chr4532 43636 45961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4532g00003 21 291 Trihelix Transcription Factor Family AT3G14180 35.484 5.97e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi4532g00003 Myb_DNA-bind_4 3.7e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4532g00003 - - gmx:100811154 397.897