Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4532g00002 ATGGTTGTCGTGGAGCTTGACAACCTGAGGGGTCAGAAACTTGAATGCACTTTGTGGGAGTCATACGTAGACGAGGTCCAAACTTTCTTAGCAAAGAATCAGAGTGCTCAAAATGTTATAATACTTCAGCTTGCAAGGATAAAGGGTTTTAGGGGAAAGATTGGAATAGCTAATACAAAGTATACGACGAAAATTCTTTTTGATTCCAATATACCTGAGATCGTAGAGTTCAAAAAAAGGCTTTCCGGTGATCTGATGGAAAGTAGTCAGATGTTGACTCAGTTGTCCAGCCCATCTTCATATTCTTATGAAAATGATTTTCTCAAGGATACAGAGAGGAAATTTCTTACTGATATTAAGAATTGCATAGATGCTACTACTTGCATTACTTATGGAACTGTAAAATCCATCGAAAGTAAATACAACTGGTGGTACAGGTCCTGTAAGAAATGTCCATATTCAGTGTGCGAAGATTTTGACAAATGGTATTGTAAGAACTGTCAGAAACATTGGAATGAATATACTCCGAAGTTCAGTGTTCAAGTCAGAGTTATTGATAACACAGATTCTTCTTCTTTCGTACTATTTGATAGAGACTGTCTTTCTTTATTAGGAGTGAGTGCTGCTGAATTGCGCGAGCAACATTTTAAGCGGGGTGCAGATTTAGAACATTATCCGGAAGAGTTGAACGTTCTTAAAGATAGATCTATGTTGTTTCAAGTGAATGTCAAAATTAGCAATTTGAACTCATACAGTGAGCCAAAATATCATGTGGCCAAAGATGATTCTGTATTTGACAGTCCTTCTGATGATAATATTATGTCGATAGGGTCAGGAAAAGCTGTGGATGTTCAGAGCCAAACCTGTGATAGTACTGATGATGCTGATATTTCTCTCACTTTGTTGTCACCATCTGTGAAGTATGATGATGTTGTTGAAGATAAAAATAATTGTTCAGTTGTTCGTCCTCTTAAAAAAATAAAGCTGGAGAAAGATTTTGATGCTGCAGCCGGTGACACTTTGGAGCAGAAAGAAAATCTGTAA 1044 0.3707 MVVVELDNLRGQKLECTLWESYVDEVQTFLAKNQSAQNVIILQLARIKGFRGKIGIANTKYTTKILFDSNIPEIVEFKKRLSGDLMESSQMLTQLSSPSSYSYENDFLKDTERKFLTDIKNCIDATTCITYGTVKSIESKYNWWYRSCKKCPYSVCEDFDKWYCKNCQKHWNEYTPKFSVQVRVIDNTDSSSFVLFDRDCLSLLGVSAAELREQHFKRGADLEHYPEELNVLKDRSMLFQVNVKISNLNSYSEPKYHVAKDDSVFDSPSDDNIMSIGSGKAVDVQSQTCDSTDDADISLTLLSPSVKYDDVVEDKNNCSVVRPLKKIKLEKDFDAAAGDTLEQKENL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4532g00002 347 CDD RPA1_DBD_B_like 1 81 - -
Gabi4532g00002 347 CDD RPA1_DBD_C 128 264 IPR047192 -
Gabi4532g00002 347 Gene3D - 1 88 IPR012340 -
Gabi4532g00002 347 Gene3D - 102 267 IPR012340 -
Gabi4532g00002 347 SUPERFAMILY Nucleic acid-binding proteins 112 260 IPR012340 -
Gabi4532g00002 347 Pfam Replication factor-A C terminal domain 130 261 IPR013955 -
Gabi4532g00002 347 SUPERFAMILY Nucleic acid-binding proteins 6 84 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4532g00002 Gabi-Chr4532 40146 41972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4532g00002 16 250 Core DNA Replication Machinery Family AT5G08020 22.727 1.14e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4532g00002 - - adu:107490971 193.741