Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4530g00001 ATGGCTGCAACACCACCTAATCTCTCTACTCTCTCTTCTTCCTCCCTTTCCAAACCCTGCGCTTTCCCTCTTCCTCTCAACAACAACAACAACAACACTCGCCTCTTCAACAAAACCCTTCCAAAACCCACATTCCTCCTCTCCCCCACTCTCTCACGCGCCGTCCCCGACACCCACAAAACCCCCTTCGTGGTTTCCGAGGTTGTCTCTGCAGGCCCTGTCCCGTACGAGGATGACGAGAAGCCGCGCGAGGAGTGCGGTGTTGTGGGCATATACGGTGACCCAGAGGCCTCTCGTCTCTGTTTCTTGGCCCTTCACGCGCTCCAGCACCGTGGCCAGGAAGGTGCCGGAATCGTTACCGTCAATAACAACGTCCTTCAATCGATAACCGGTGTTGGGCTTGTTTCCGATGTGTTCAAAGACGAGTCCAAGCTTGACCAGTTACCTGGTAATTTGGCTATTGGGCATGTTCGTTACTCAACCGCAGGCCAATCCATGCTCAAGAATGTGCAGCCTTTCGTTGCTGGGTATCGTTTTGGCTCTGTTGGGGTTGCTCATAATGGCAATTTGGTGAACTATGGCACCTTAAGGGCCAAGCTTGAAGAGAATGGATCCATTTTTAACACCACTTCTGATACTGAGGTTGTTCTTCACCTTATTGCCACCTCAAAGCATAGACCTTTCATATTGAGGATTGTTGATGCCTGTGAAAAGCTTGAAGGGGCTTATTCTATGGTGTTTGTTACTGAGGATAAGCTTGTTGCGGTGAGGGATCCCTTTGGATTTCGACCTTTGGTTATGGGAAGGAGAAGTAATGGTGCTGTTGTTTTTGCCTCTGAGACTTGTGCTCTTGATTTGATTGAAGCCACTTATGAGAGGGAGGTGTACCCGGGTGAGGTTTTGGTGGTGGACAAGAATGGCCTTCAATCCCTTTGTCTCATGTCTCATCCACAGCCAAAGCAGTGTATTTTTGAGCATATATACTTTGCACTGCCCAATTCAGTGGTTTTTGGGAGGTCGGTGTATGAATCTCGCAGGCAATTTGGGGAGATATTGGCCACTGAGAGCCCAGTGGATTGTGATGTTGTTATTGCTGTTCCAGATTCTGGTGTGGTGGCTGCGCTTGGTTATGCTGCCAAAGCTGGGGTTCCCTTTCAGCAGGGTCTGATCAGGTCACACTATGTGGGGAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGGGTGAAGTTGAAGCTCTCACCTGTCCGTGCTGTGATTGAAGGTAAGAGGGTTGTGGTTGTGGATGATTCAATTGTGAGGGGAACTACATCATCTAAGATTGTAAGGTTACTGAAGGAGGCTGGTGCCAAGGAAGTTCACATGAGGATTGCAAGCCCTCCAATTATTGGGTCATGTTATTATGGGGTGGACACACCAAGCTCGGAGGAGTTGATATCTAATAGAATGAGTTTGGAGGAAATAAGGGAGTTTATTGGATCAGATTCACTTGCTTTTCTGTCAATTGATAGCTTGCAGAGGCTTTTGGGTAATGACAGTCCTAACTTCTGTTATGCTTGTTTCTCTGGGAAATACCCTGTTGAGCCCAGAGAACTTAAAGTGAAGAGGGTTGGTGACTTCGTGGATGATGGCTTAAATGGGAGTTTAGAATCTATTGATGGGGGTTGGGTTCAAGCAAACCGAAATCTGAAAGAGGTGAAGGTTGCTACTAGTCTCTGA 1725 0.4794 MAATPPNLSTLSSSSLSKPCAFPLPLNNNNNNTRLFNKTLPKPTFLLSPTLSRAVPDTHKTPFVVSEVVSAGPVPYEDDEKPREECGVVGIYGDPEASRLCFLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFKDESKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYGTLRAKLEENGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDKNGLQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVIEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSLEEIREFIGSDSLAFLSIDSLQRLLGNDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANRNLKEVKVATSL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4530g00001 574 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 86 306 IPR017932 -
Gabi4530g00001 574 Pfam Phosphoribosyl transferase domain 361 456 IPR000836 -
Gabi4530g00001 574 Hamap Amidophosphoribosyltransferase [purF]. 85 527 IPR005854 GO:0004044|GO:0009113
Gabi4530g00001 574 CDD PRTases_typeI 349 460 IPR000836 -
Gabi4530g00001 574 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 86 310 IPR029055 -
Gabi4530g00001 574 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 86 528 IPR029055 -
Gabi4530g00001 574 Pfam Glutamine amidotransferase domain 165 284 IPR017932 -
Gabi4530g00001 574 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 84 534 - -
Gabi4530g00001 574 CDD GPATase_N 86 337 IPR035584 -
Gabi4530g00001 574 NCBIfam amidophosphoribosyltransferase 86 528 IPR005854 GO:0004044|GO:0009113
Gabi4530g00001 574 Gene3D - 346 510 IPR029057 -
Gabi4530g00001 574 SUPERFAMILY PRTase-like 322 533 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4530g00001 Gabi-Chr4530 4738 6965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4530g00001 77 560 PRT Gene Family AT2G16570 86.214 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4530g00001 K00764 - gmx:100801720 935.25