Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi452g00002 ATGTCTTCCAACAAGAAAGGACTTTTGAGAACCGTTTTCACATCAAATGGAAGCTGTGGCTGTGGCAAAACAAAGGCCTTTGAAGTACATGAACCAATCCCCAAACCCAAAATCTCCATTCACAAAAAGACAAACCTCAACACCATGGCTTCTTCAACCACAACTTCAGGGGAACACAATAATAATGGTAATGATGAAGACTTCACCTTCACCTCCACCACAATCTCTGAAGCTGATGAAACTAGTCATGATCATGACCATAACAAGAGCCCCAAGAACAGTAGTAATGTTGAACCAAAACGAAGCCCTCTCATGGATAGCATGGCCTTTGTGAAGGACTCTGCGGATCCATATCATGATTTCAAGCACTCAATGCTTCAAATGATCTTTGAGAAGGAGATTGACTCAGAAGATGATCTTCAAGATCTTCTACAATGCTTTCTTCATCTGAATGCTCTTTGTCACCATCATGTCATTGTTAAAGCCTTCAATGATATCTGTGAAGAAGCTTTCCCTGACAAGGTTAGTACTACACCTTCTGCTACTGAAACATCTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCACAGGGAACCGCAACATCATCGTTCGAAAGAATCAGTGAATATGCCAATGGATCCATCCTAG 654 0.419 MSSNKKGLLRTVFTSNGSCGCGKTKAFEVHEPIPKPKISIHKKTNLNTMASSTTTSGEHNNNGNDEDFTFTSTTISEADETSHDHDHNKSPKNSSNVEPKRSPLMDSMAFVKDSADPYHDFKHSMLQMIFEKEIDSEDDLQDLLQCFLHLNALCHHHVIVKAFNDICEEAFPDKVSTTPSATETSPSPSPSPSPSPSHREPQHHRSKESVNMPMDPS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi452g00002 217 ProSiteProfiles OVATE domain profile. 110 169 IPR006458 -
Gabi452g00002 217 NCBIfam uncharacterized plant-specific domain TIGR01568 108 167 IPR006458 -
Gabi452g00002 217 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 170 IPR038933 GO:0045892
Gabi452g00002 217 MobiDBLite consensus disorder prediction 41 77 - -
Gabi452g00002 217 Pfam Transcriptional repressor, ovate 114 169 IPR006458 -
Gabi452g00002 217 MobiDBLite consensus disorder prediction 78 94 - -
Gabi452g00002 217 MobiDBLite consensus disorder prediction 38 102 - -
Gabi452g00002 217 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gabi452g00002 217 MobiDBLite consensus disorder prediction 175 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi452g00002 Gabi-Chr452 103262 104304 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi452g00002 Ovate 4.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi452g00002 - - gmx:102660065 217.238