Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4529g00004 ATGAGGAAACAACAGCAACAAACTCAGCAATCAGAGTTTTTGAATTGCCCAAGATGTGACTCTACAAACACCAAATTTTGTTACTACAACAACTGCAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGTAAGAGGCACTGGATTAAAGGCGGAACTTTACGCAATGTTCCTATTGGTGGTGGCAGGAAGAATAAGAGGGTAAAAAAATCAACCACCCCCTCTACTTGCACCACCACTGTCTCAACCTTAATTGGCAACACGGGTGGCGGGTCATGTAGCCACATGACAATGAATCCAACTCCTCTTGCAGTGAGTAATCAGAAAAGCATCCCTTCCTCTTTTTATCAAGTTCAAGCTTTGATTCGTCAACAGAATCTGATGAATACTGGAGACTTAGAAAGCAAAGATTTTGGTATTGGTAATAGCATCTTTCTGAGTTCAACTTTGCCTCTTCCTCAAAACCAAAGCCTACACTTTCCCTTCTCGACCTCAAGCTCTTTTGACACAAACCCTTGTGCAGTATCAACTTCTCTGCGATCCTCCAATGTTTATAACTATGGGGAGGAGTTTAAAACAATGGAGGAACCAACCATCAACTACATAATGCCCAGCACAAGTGGCAGTAACACACAACCATGGGAGATACCAGCAACAAGTGCTGGCATGGAAACTTCAAACTATTGGAATTGGGAGGACATTGATTCTTTGGTCTCAACTGATCTGAAAGATCCCTGGGATGATTCTGATATCAAACCATGA 762 0.4265 MRKQQQQTQQSEFLNCPRCDSTNTKFCYYNNCNKSQPRHFCRACKRHWIKGGTLRNVPIGGGRKNKRVKKSTTPSTCTTTVSTLIGNTGGGSCSHMTMNPTPLAVSNQKSIPSSFYQVQALIRQQNLMNTGDLESKDFGIGNSIFLSSTLPLPQNQSLHFPFSTSSSFDTNPCAVSTSLRSSNVYNYGEEFKTMEEPTINYIMPSTSGSNTQPWEIPATSAGMETSNYWNWEDIDSLVSTDLKDPWDDSDIKP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4529g00004 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 173 IPR045174 GO:0003700|GO:0006355
Gabi4529g00004 253 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Gabi4529g00004 253 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4529g00004 Gabi-Chr4529 29368 30161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4529g00004 2 103 C2C2-Dof Transcription Factor Family AT1G51700 48.182 4.19e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi4529g00004 zf-Dof 8.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4529g00004 - - gmx:778119 347.436