Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00083 ATGGAAAGTGGTGAACTGAGAGTGGCAAGTGCACGCATAGGAAGCTCTAGTATCTGGAGAAGTAGTGCAGTTGATGTTTTTTCAGGGTCTTCACGGAAAGATGATGATGAAGAAGAGCTTAAATGGGCTGCGATTGAGAAACTTCCCACGTATCTACGCATGACCAGAGGTATACTCACTGAAGCAGAAGGTCAATCTTCAGAGATTGATATAATCAATCTTGGGCCATTACAGAGGAAGAACTTGGTGGAGAGGCTAGTCAATATTGCCGAGGAAGATAATGAGAAGTTCTTGTTGAAGTTAAGAGAACGCATTGATCGGGTTGGAATTGATATTCCAACAATTGAAGTCCGTTTTGAGCACTTGAATGTTGAAGCTGAAGCTCATGTAGGAAAAAGGGCATTGCCGACAGTCTTTAACTTCTGCATTAATTTGTTTGAGGGGTTCTTGAATTCTCTTCACCTTCTTCCCAGTCGAAAGAAGCCATTCACTGTTCTTTATGATGTTAGTGGAATCATCAAGCCTAAAAGAATGACACTGCTATTAGGCCCTCCAAGCTCAGGAAAGAGCACATTATTGTTGGCACTGGCTGGAAGACTCAGCAAAGATCTAAAATTTTCTGGGCGAGTTGCTTATAATGGTCAAGGGATGGAGGAATTTGTACCTCAGAGAACATCAGCTTATATAAGTCAAACTGATCTGCACATTGGAGAAATGACAGTTAGAGAAACATTGGCTTTTTCAGCAAGGTGTCAAGGGATCGGAACCCGTTATGAGATGCTAGTAGAATTATCAAGAAGAGAGAAGGCCGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAACCAATGTAGTTACAGATTATATAATTAAGATTTTGGGACTAGATGTTTGTGCTGATACCGTGGTAGGGGATGACATGATTCGGGGTATTTCTGGAGGACAAAAAAAGAGAGTCACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTTTTCATGGATGAAATATCAACTGGTTTGGACAGTTCTACCACATTCCAAATGGTTAATTCTATAAGACAATCTATCCACATTCTGAATGGAACAGCTGTCATCTCTCTTCTCCAGCCAGCACCAGAAACTTATGAGTTATTTGATGATATAATTCTCCTCTCAGATGGACAAATTGTCTATCAGGGTCCAAGGGAAAATGTTCTTGAGTTTTTTGAATATATGGGTTTCAAATGTCCAGAGAGAAAAGGAGTAGCAGACTTTTTACAAGAAGTAACATCAAGAAAGGATCAAGAGCAGTACTGGGCAAATAAAGACGAGCCATATATTTTTATCACTGTTAAAGAATTTGCTGAAGCATTTCAATCATTTCACATTGGTCGAAGACTTGGTGACGAACTTGCTACTCCATTTGACACCTCCAAAGGCCACCCTGCTGTTTTAACCAAAAACAAATATGGTGTTAACAAGAAGGAACTCTTAAAAGCCTGTGTATCCAGAGAATTCTTACTCATGAAAAGGAATTCTTTTGTCTATATTTTCAAGATGTGGCAATTGATTTTAACGGGCTTCATAACAATGACATTATTCCTGAGAACTGAGATGCACCGGGATACAGAAACCGATGGTGGGATCTTTATGGGTGCTCTTTTCTTCGTAATGATTGTAATCATGTTCAATGGATACTCTGAGCTATCCTTGTCCATCATGAAACTTCCTGTGTTCTATAAGCAAAGGGACCTTCTCTTTTTTCCTTCTTGGGCATACGCTCTTCCTACATGGATCCTTAAGATTCCTGTCAGCTTAGTAGAAGTTGGTGTTTGGGTAGTGATGACTTACTATGTTATAGGTTTTGATCCAAATGTTGAGAGGTTTATCAAACAGTACTTTCTGCTAGTTTGTGTCAACCAAATGGCATCTGGACTTTTTCGATTTATGGGTGCAGTTGGGAGGAACATTATTGTCGCAAACACAGTTGGATCATTTGCTTTACTTGCAGTTATGGTCATGGGTGGATTCATCCTATCCAGAGTTGATGTGAAGAAGTGGTGGTTATGGGGTTATTGGGTCTCTCCCATGATGTATGGACAGAATGCTATAGCTGTGAATGAATTCCTTGGAAAGAGTTGGTCACATGTTCCACCTAATTCAACAGAACCATTAGGAATACAGGTCTTGAAGGCACGTGGGATTTTCCCTGAAGCATACTGGTATTGGATTGGAGTTGGAGCTTCCATTGGATACATGTTACTATTCAACTTACTTTTCCCATTGGCCTTACATTATCTTGACCGTAAGTACTGTATAAGTATCCTATACATGTATAAAGGGAATGAAAGTCGAAGAAGTTTGTCCTCTAGAACACTGTCAGCAAGAGTGGGAAGCATTAGTGCAGCTGATGACAACAGGAAGCGAGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGTTATGCAGTGGACATGCCACAGGAAATGAAGAACCAAGGCATTCTTCAAGATCGACTTGAACTTTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTTTGACAGCTCTAATGGGTGTAAGTGGTGCTGGTAAAACGACTCTAATGGACGTGTTGTCTGGAAGAAAAACAGCAGGATATATTCAAGGGCAAATCACTATATCCGGTTACCCTAAAAAGCAAGAAACCTTTGCTCGCATATCAGGATATTGTGAGCAGACTGATATCCACTCTCCACATATTACAGTCTATGAGTCTTTGGTTTATTCTGCATGGCTCCGGTTACCCCCTGAGGTTGATTCTTCCACCAGACAGATGTTCATTGAGGAAGTTATGGAGCTGGTGGAGCTAACTCCATTAAGAGAAGCCCTGGTTGGATTGCCTGGAGTTGATGGTCTGTCCACGGAGCAGCGCAAGAGGTTAACAATTGCTGTTGAACTTGTTGCTAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCAAGAGCTGCTGCTATAGTAATGAGAACAGTGAGGAATACAGTGGATACAGGGAGAACTGTGGTGTGTACAATCCACCAGCCTAGCATTGATATATTTGATGCTTTTGATGAGCTACTTCTCTTGAAGCGTGGAGGTGAGGAAATATATGTGGGGCCTTTAGGCCAGCAGTGTTCTCACCTTATCAATTACTTTGAGGGAATTAATGGAGTGCCAAAAATTAAGAATGGTTATAATCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAACTTCGCAGCAATATACAAGAATTCCGACCTATATAGGAGAAACAAGGACTTGATCAGGGAACATAGTACACCTCCAGCGGGTTCTGAAGAGTTGTACTTCCCCACAAAGTACTCAATGTCTTTCTTCACCCAATGTATGGCTTGCCTTTGGAAACAGCATCTATCATACTGGCGAAATCCTCCATATAGTGCAGTGAGACTCTTGTTCACAACATTCATAGCTTTGTTGTTCGGGACAATATTTTGGGATATTGGCTCCAAAAGGTATAGAAAACAAGATCTATTTAATGCAATGGGATCCATGTACGCTGCAGTCCTCTTCATTGGGGTACAAAATGCTACATCTGTGCAGCCAGTTGTAGCCATTGAGAGAACAGTTTTCTATAGAGAAAAAGCTGCTGGGATGTACTCAGCTTTGCCTTATGCATTTGGACAGGTTGCCATTGAGATCCCATACGTACTCATACAGACCCTCGTATATGGGGTTATAGTGTATGCTATGATTGGATTTGATTGGACTCCTACCAAGTTCTTTTGGTATATCCTCTTCATGTTCTTCAGCTTTTTATACTTTACCTTATATGGGATGATGGCTGTTGGTGCTACCCCGGATCCCAACATTGCTGCTATAGTTTCAATTGGGTTCTACTTGATATGGAACCTTTTCTCAGGATTTGTCATTCCAAGAAGTAGGATGCCAGTATGGTGGAGATGGTACTTTTGGATTTGTCCTGTTTCTTGGACACTATATGGATTGGTTACTTCACAATTTGGGGATATAAAAGAATATATGGAGAATGGAGACACTGTGGAAGAGTTTGTTTCGAGTTATTTTGGGTATAGATATGATTTCATAGGCATTGCTGCGGCTGTGCTTGTTGGTTTTTCACTGCTCTTTGGATTTATTTTTGCCTTTTCAATTAAGACATTCAATTTCCAAAAGAGATGA 4269 0.409 MESGELRVASARIGSSSIWRSSAVDVFSGSSRKDDDEEELKWAAIEKLPTYLRMTRGILTEAEGQSSEIDIINLGPLQRKNLVERLVNIAEEDNEKFLLKLRERIDRVGIDIPTIEVRFEHLNVEAEAHVGKRALPTVFNFCINLFEGFLNSLHLLPSRKKPFTVLYDVSGIIKPKRMTLLLGPPSSGKSTLLLALAGRLSKDLKFSGRVAYNGQGMEEFVPQRTSAYISQTDLHIGEMTVRETLAFSARCQGIGTRYEMLVELSRREKAENIKPDPDLDIYMKAAALEGQETNVVTDYIIKILGLDVCADTVVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSIRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYIFITVKEFAEAFQSFHIGRRLGDELATPFDTSKGHPAVLTKNKYGVNKKELLKACVSREFLLMKRNSFVYIFKMWQLILTGFITMTLFLRTEMHRDTETDGGIFMGALFFVMIVIMFNGYSELSLSIMKLPVFYKQRDLLFFPSWAYALPTWILKIPVSLVEVGVWVVMTYYVIGFDPNVERFIKQYFLLVCVNQMASGLFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRVDVKKWWLWGYWVSPMMYGQNAIAVNEFLGKSWSHVPPNSTEPLGIQVLKARGIFPEAYWYWIGVGASIGYMLLFNLLFPLALHYLDRKYCISILYMYKGNESRRSLSSRTLSARVGSISAADDNRKRGMVLPFTPLSITFDEISYAVDMPQEMKNQGILQDRLELLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTAGYIQGQITISGYPKKQETFARISGYCEQTDIHSPHITVYESLVYSAWLRLPPEVDSSTRQMFIEEVMELVELTPLREALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGQQCSHLINYFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVNFAAIYKNSDLYRRNKDLIREHSTPPAGSEELYFPTKYSMSFFTQCMACLWKQHLSYWRNPPYSAVRLLFTTFIALLFGTIFWDIGSKRYRKQDLFNAMGSMYAAVLFIGVQNATSVQPVVAIERTVFYREKAAGMYSALPYAFGQVAIEIPYVLIQTLVYGVIVYAMIGFDWTPTKFFWYILFMFFSFLYFTLYGMMAVGATPDPNIAAIVSIGFYLIWNLFSGFVIPRSRMPVWWRWYFWICPVSWTLYGLVTSQFGDIKEYMENGDTVEEFVSSYFGYRYDFIGIAAAVLVGFSLLFGFIFAFSIKTFNFQKR 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00083 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 825 1077 IPR003439 GO:0005524
Gabi4527g00083 1422 FunFam ABC transporter G family member 34 153 457 - -
Gabi4527g00083 1422 Pfam Plant PDR ABC transporter associated 719 773 IPR013581 -
Gabi4527g00083 1422 Pfam ABC-2 type transporter 381 434 IPR043926 GO:0140359
Gabi4527g00083 1422 FunFam ABC transporter G family member 40 839 1069 - -
Gabi4527g00083 1422 SMART AAA_5 862 1054 IPR003593 GO:0016887
Gabi4527g00083 1422 SMART AAA_5 175 407 IPR003593 GO:0016887
Gabi4527g00083 1422 CDD ABCG_PDR_domain2 822 1060 IPR034003 -
Gabi4527g00083 1422 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Gabi4527g00083 1422 Pfam ABC-2 type transporter 1150 1364 IPR013525 GO:0016020|GO:0140359
Gabi4527g00083 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 842 1064 IPR027417 -
Gabi4527g00083 1422 Gene3D - 153 462 IPR027417 -
Gabi4527g00083 1422 Pfam ABC transporter 853 1005 IPR003439 GO:0005524
Gabi4527g00083 1422 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 423 IPR027417 -
Gabi4527g00083 1422 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Gabi4527g00083 1422 Pfam ABC transporter 168 348 IPR003439 GO:0005524
Gabi4527g00083 1422 CDD ABCG_PDR_domain1 148 405 IPR034001 -
Gabi4527g00083 1422 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Gabi4527g00083 1422 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1422 - -
Gabi4527g00083 1422 Gene3D - 839 1069 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00083 Gabi-Chr4527 677622 684759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00083 863 1079 Calmodulin-binding Proteins AT2G36910 25.000 9.78e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00083 K08711 - gmx:100804030 2613.18