Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00077 ATGGAAGAAATTGAAGGGTTGAATTGTTGTGGTGAAAGTAGGAGCTCTAGTGAGAGTCGACCTCCCAATCCAAACCCACCAAGCCAATGCCACAGCACTGATCCTTTGGTGCGGCCATGCAAGAATTCCCTTGTTCGCCACCATTCTCTTATGAAAACAAAGTTGTCTGATGTATTAGCTGAGCCAGGACATGTATCTGAAGATTTTCTGTCTGATTTCCTCCCAATGCTTCGTTCTGGAGCATGTGCTGATATTGGATTCCGGTCAAGTATGGAAGATGTATATGTTTGTGCTGACAACTTTATTGAGGATTACGGGCTCAAGAACAATATAGATGGACCCAGTGCTTTTTATGGGGTATTTGATGGGCATGGTGGAAAGCATGCTGCTGACTTTGCTTGTCATCATTTGCCGAAGTTCATTCTTGAGGTTGAAGATTTCCCAAGAGATATTGAAAGGATATTTGCTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTGCTCTTGTTATTGGAAGGTTGCTAGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCGATTTGCAGCAAAGAGAAGAAGCGTATAGAGGCATCTGGGGGATATGTCTATGACGGTTATCTTAATGGACAACTTAATGTTGCTCGCGCTCTTGGTGACTGGCACATGGAAGGAATGAAAAGCAGAGATGGTGGACCACTCAGTGCAGAACCTGAACTCATGACTTCAAAGCTCACTGCTGAGGATGAATTTCTCATCATGGGTAGCGATGGGATTTGGGAAGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACAACCCAGTCATGTGTAGTAAAGATCTGGTTGATGAGGCTTTAAAGAGAAAGAGCGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTCCAGCAGCAGCCTCCACCTAACTTGGTGGCACCGCGCTCTAGAGTACACAGGAGCTTCTCTGCTGAAGGTTTGAAAGAGTTGCAAAGCTTCCTGGACGACTTGGGTAATTGA 1134 0.4577 MEEIEGLNCCGESRSSSESRPPNPNPPSQCHSTDPLVRPCKNSLVRHHSLMKTKLSDVLAEPGHVSEDFLSDFLPMLRSGACADIGFRSSMEDVYVCADNFIEDYGLKNNIDGPSAFYGVFDGHGGKHAADFACHHLPKFILEVEDFPRDIERIFASAFLQTDNAFAEACSLDAALASGTTALAALVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSRDGGPLSAEPELMTSKLTAEDEFLIMGSDGIWEVFRSQNAVDFARRRLQEHNNPVMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDDLGN 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00077 377 ProSitePatterns PPM-type phosphatase domain signature. 117 125 IPR000222 GO:0043169
Gabi4527g00077 377 FunFam Probable protein phosphatase 2C 22 63 344 - -
Gabi4527g00077 377 Pfam Protein phosphatase 2C 80 333 IPR001932 -
Gabi4527g00077 377 ProSiteProfiles PPM-type phosphatase domain profile. 78 341 IPR001932 -
Gabi4527g00077 377 SUPERFAMILY PP2C-like 70 343 IPR036457 -
Gabi4527g00077 377 Gene3D - 66 345 IPR036457 -
Gabi4527g00077 377 SMART PP2C_4 68 339 IPR001932 -
Gabi4527g00077 377 PANTHER PROTEIN PHOSPHATASE 2C 41 339 IPR015655 GO:0004722|GO:0006470
Gabi4527g00077 377 CDD PP2Cc 78 341 IPR001932 -
Gabi4527g00077 377 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00077 Gabi-Chr4527 673006 676719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00077 1 377 PP2C-type Phosphatase Gene Family AT2G25620 66.582 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Gabi4527g00077 PP2C 9.9e-68 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00077 K14803 - gmx:100815725 637.876