Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00066 ATGGCCGTGCTGAGAATGGCTCAGCCTCAGCATAACAATGGCAACAACAACAACAACAACAGCAGCAACAGCAACAGTGTGAGCGAGCACTTGGTCAAACCGGTCCTCCATGATTTTCTAGGCATGAAGCCAAATGATAATTCACCTAAAACCGCCGATATGAGGTTGTCGGAAGTGTCGACAACCCTGTCTGTTGCCGCCTCTTCCGCCGGTACACGTGGCCCCTTCTCCACCACCTCTGACATCGGTTCTGAAAAACAGGTAGGAAATCATCTTGAGGGAGTTCCATTCTATGGTCCTAGGAGTGATTTTTCTGGCAGTGAGATGCCTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACTTTTATGGGTTCCTCCCGAGATGCCTTTCAAATGGTCCCTGACTCCTTTCAAAACTCACATATGATGAAGGTACTCCGGAATGCTGCTGGAGGAGAGAGGTCTAGAAGGGCCAATGATGATGAAGTGTTACTTGGTATGCAGTCACCGAAGCCAACTTCTGCTTCTCAGATATTTCAGCCTCCCACCAGTAGTAAGATTGATGCCAATAAATGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCATCATCCACCGCGTGGGGGACAATTGACACCTTTTGTACACCAAATAGCTTCAAACAAGATTAGGGATACCAATGCTGGTCCTTCATTTATCTCTCAGCCAGCAGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCTTGGAATTTTAAGTTCTATAAACGCAACTGCTACTGCCACTGAGAAAACTTCTTCTGCAGCGCTGCTTGGTGGAAGTAGGCCAAAGCCTCCAACTAATATAATAGAGTCATCTGTACCTCAAAGTCAACATGGGCTAACATCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCAACAGCATTCTCGCCGAAATCTGCTGTAAAGCTGGTTAATGGTAGTAACTTGCACAGTGGAGAAAATGAAACAGGTATAGTGAGTAATGTCCCATTCCCACAAGAGCTTCATGGGAGATTGTCTATCATTGGCAGTTCTAGCCATGCCATTGGACCTGGTGATCGAGTATCTACTCTTGCAGGGGGACACCAAGGAAGCATTTTAGCTAAAGAAACAAGAAATCCGGTTCAAGCAACAGATGCCAGTTCTGAAGACAAAAGAGCACAGTGA 1290 0.4589 MAVLRMAQPQHNNGNNNNNNSSNSNSVSEHLVKPVLHDFLGMKPNDNSPKTADMRLSEVSTTLSVAASSAGTRGPFSTTSDIGSEKQVGNHLEGVPFYGPRSDFSGSEMPNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHMMKVLRNAAGGERSRRANDDEVLLGMQSPKPTSASQIFQPPTSSKIDANKWERSILMNVGPSMHHPPRGGQLTPFVHQIASNKIRDTNAGPSFISQPAADEGSRTGIKGLGILSSINATATATEKTSSAALLGGSRPKPPTNIIESSVPQSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKLVNGSNLHSGENETGIVSNVPFPQELHGRLSIIGSSSHAIGPGDRVSTLAGGHQGSILAKETRNPVQATDASSEDKRAQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00066 429 ProSiteProfiles Tify domain profile. 299 334 IPR010399 -
Gabi4527g00066 429 MobiDBLite consensus disorder prediction 396 429 - -
Gabi4527g00066 429 MobiDBLite consensus disorder prediction 8 28 - -
Gabi4527g00066 429 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 104 362 IPR040390 -
Gabi4527g00066 429 MobiDBLite consensus disorder prediction 112 127 - -
Gabi4527g00066 429 MobiDBLite consensus disorder prediction 1 28 - -
Gabi4527g00066 429 SMART tify_2 299 334 IPR010399 -
Gabi4527g00066 429 MobiDBLite consensus disorder prediction 99 127 - -
Gabi4527g00066 429 Pfam tify domain 301 333 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00066 Gabi-Chr4527 582312 587255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00066 11 332 Tify Gene Family AT4G32570 40.000 2.62e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4527g00066 tify 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00066 - - gmx:100807222 625.935