Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00065 ATGGCCGTGCTGAGAATGGCTCAGCCTCAGCATAACAATGGCAACAACAACAACAACAACAGCAGCAACAGCAACAGTGTGAGCGAGCACTTGGTCAAACCGGTCCTCCATGATTTTCTAGGCATGAAGCCAAATGATAATTCACCTAAAACCGCCGATATGAGGTTGTCGGAAGTGTCGACAACCCTGTCTGTTGCCGCCTCTTCCGCCGGTACACGTGGCCCCTTCTCCACCACCTCTGACATCGGTTCTGAAAAACAGGTAGGAAATCATCTTGAGGGAGTTCCATTCTATGGTCCTAGGAGTGATTTTTCTGGCAGTGAGATGCCTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACTTTTATGGGTTCCTCCCGAGATGCCTTTCAAATGGTCCCTGACTCCTTTCAAAACTCACATATGATGAAGGTACTCCGGAATGCTGCTGGAGGAGAGAGGTCTAGAAGGGCCAATGATGATGAAGTGTTACTTGGTATGCAGTCACCGAAGCCAACTTCTGCTTCTCAGATATTTCAGCCTCCCACCAGTAGTAAGATTGATGCCAATAAATGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCATCATCCACCGCGTGGGGGACAATTGACACCTTTTGTACACCAAATAGCTTCAAACAAGATTAGGGATACCAATGCTGGTCCTTCATTTATCTCTCAGCCAGCAGCTGATGAAGGATCTAGAACTGGAATCAAGGGCCTTGGAATTTTAAGTTCTATAAACGCAACTGCTACTGCCACTGAGAAAACTTCTTCTGCAGCGCTGCTTGGTGGAAGTAGGCCAAAGCCTCCAACTAATATAATAGAGTCATCTGTACCTCAAAGCAGTCAACATGGGCTAACATCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCAACAGCATTCTCGCCGAAATCTGCTGTAAAGCTGGTTAATGGTAGTAACTTGCACAGTGGAGAAAATGAAACAGGTATAGTGAGTAATGTCCCATTCCCACAAGAGCTTCATGGGAGATTGTCTATCATTGGCAGTTCTAGCCATGCCATTGGACCTGGTGATCGAGTATCTACTCTTGCAGGGGGACACCAAGGAAGCATTTTAGCTAAAGAAACAAGAAATCCGGTTCAAGCAACAGATGCCAGTTCTGAAGACAAAAGAGCACAGTGA 1293 0.4594 MAVLRMAQPQHNNGNNNNNNSSNSNSVSEHLVKPVLHDFLGMKPNDNSPKTADMRLSEVSTTLSVAASSAGTRGPFSTTSDIGSEKQVGNHLEGVPFYGPRSDFSGSEMPNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHMMKVLRNAAGGERSRRANDDEVLLGMQSPKPTSASQIFQPPTSSKIDANKWERSILMNVGPSMHHPPRGGQLTPFVHQIASNKIRDTNAGPSFISQPAADEGSRTGIKGLGILSSINATATATEKTSSAALLGGSRPKPPTNIIESSVPQSSQHGLTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKLVNGSNLHSGENETGIVSNVPFPQELHGRLSIIGSSSHAIGPGDRVSTLAGGHQGSILAKETRNPVQATDASSEDKRAQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00065 430 ProSiteProfiles Tify domain profile. 300 335 IPR010399 -
Gabi4527g00065 430 MobiDBLite consensus disorder prediction 8 28 - -
Gabi4527g00065 430 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 104 362 IPR040390 -
Gabi4527g00065 430 MobiDBLite consensus disorder prediction 1 28 - -
Gabi4527g00065 430 MobiDBLite consensus disorder prediction 112 127 - -
Gabi4527g00065 430 MobiDBLite consensus disorder prediction 99 127 - -
Gabi4527g00065 430 Pfam tify domain 302 334 IPR010399 -
Gabi4527g00065 430 SMART tify_2 300 335 IPR010399 -
Gabi4527g00065 430 MobiDBLite consensus disorder prediction 397 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00065 Gabi-Chr4527 582160 587255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00065 11 333 Tify Gene Family AT4G32570 40.000 1.49e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4527g00065 tify 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00065 - - gmx:100819293 629.787