Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00064 ATGAATAAAGTAAATACAGTTTGTGCCAAAGACGAAGAGCGTCCACTCCGAATCACTAGAGCAAGGGCTAGAGCCTTGGGAGGGATTCCCCCCTACTCAAGACCACCGTCCTTTAAAAATGAACAAAAAAACGCACTTCGAGTAAATCCAAAAAGGGCAGCTTCCGAGAACAAAAATTCTGAGGTTGTTCCTGCTATTCTTCAGCCTAAGAAAAGGGCAGTGTTCACAGATGTAACAAACATCTGCGCAAAATCACATGATAAGTCTATTAAAGCATCAAAAGTTCTGGCAAGAGGAGTTAATAAGAAGAAAAAAACAAAGCTAGCTTCAGGTGTCTCCATTGAAGTTTCGTCATCAAAAGAGGATCTTAAAGCAAAGTTAGCTGAAGAATTATTCACCGTAAGGACGGTAGAATCAAATGATGCAGTTGCTGCAGCAACTTTGGAGGATGAAGAGCCAGCAGGACATTGTATGTCCAATAGCACAAGAGAACATGTTACAGCAGACACCAAGCTTTCAATGGAAAACTCCGAAAAATCTGATGAACACTTGAGCTCTCCAAGCAAAGATATGGCTTGTGAGAAGCTAGGAGCCTCAGATTGCAAGGCCATTGTGGACATTGACTCAGAGTTAAAGGATCCTCAAGTTTGGAGTTCTTATGCCCCTGATATATACAACAATATTCGGGTCACAGAGCTTGATAGGAGACCATTAACCAACTACATGGATAAGTTGCAGCAAGATACTACTCCAAGCATGCGCGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGTTGGTTCCAAACACTCTTTACCTGACAGTGAACCTCATTGATCGGTTTCTCTCAACAAGTTTGATTCAGAAACAAAGGCTCCAGTTGCTTGGTGTTACTTGCATGCTGATTGCATCAAAGTACGAAGAGATTTGTGCTCCTCAAGTGGAGGAATTTTGCTTCATCACAGATAATACATACACAAAAGAAGAGGTATTGAAAATGGAACGTGAAGTACTAAACCTTTTGCGTTTTCAATTATCTGTTCCCACAACCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATGTTCTTACAAGGTTCCTCGTGTTGAACTGGAATTCCTGGCAAATTATTTAGCGGAGCTTACTCTTGTTGAATACAGATTCTTGCAGTTTCTACCTTCTCTTATAGCTGCATCTGCTCTATTCCTTGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATCCAACTCTGGAGCACTATACAAACTACAAAGCTTCAGAGCTCAAAACTGTTGTTTTAGCGCTGAAAGATCTGCAACTTAATACCAAAGGGTGTCCCCTGAATGCTATACGTGAGAAATATAAACAAGAGAAGTTCAATTGTGTGGCAAAGCTGTCTCCAAAACCTGTGCAGTCACTCTTCCAGGTTCAAGTGTAA 1458 0.4136 MNKVNTVCAKDEERPLRITRARARALGGIPPYSRPPSFKNEQKNALRVNPKRAASENKNSEVVPAILQPKKRAVFTDVTNICAKSHDKSIKASKVLARGVNKKKKTKLASGVSIEVSSSKEDLKAKLAEELFTVRTVESNDAVAAATLEDEEPAGHCMSNSTREHVTADTKLSMENSEKSDEHLSSPSKDMACEKLGASDCKAIVDIDSELKDPQVWSSYAPDIYNNIRVTELDRRPLTNYMDKLQQDTTPSMRGILIDWLVEVSEEYKLVPNTLYLTVNLIDRFLSTSLIQKQRLQLLGVTCMLIASKYEEICAPQVEEFCFITDNTYTKEEVLKMEREVLNLLRFQLSVPTTKTFLRRFIQAAQCSYKVPRVELEFLANYLAELTLVEYRFLQFLPSLIAASALFLARWTLNQSEHPWNPTLEHYTNYKASELKTVVLALKDLQLNTKGCPLNAIREKYKQEKFNCVAKLSPKPVQSLFQVQV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00064 485 CDD CYCLIN_AtCycA-like_rpt2 352 466 - -
Gabi4527g00064 485 SUPERFAMILY Cyclin-like 351 474 IPR036915 -
Gabi4527g00064 485 Pfam Cyclin, C-terminal domain 352 474 IPR004367 -
Gabi4527g00064 485 SUPERFAMILY Cyclin-like 212 349 IPR036915 -
Gabi4527g00064 485 SMART Cyclin_C_2 352 475 IPR004367 -
Gabi4527g00064 485 Gene3D - 223 471 - -
Gabi4527g00064 485 MobiDBLite consensus disorder prediction 153 189 - -
Gabi4527g00064 485 MobiDBLite consensus disorder prediction 24 59 - -
Gabi4527g00064 485 SMART cyclin_7 356 444 IPR013763 -
Gabi4527g00064 485 SMART cyclin_7 259 343 IPR013763 -
Gabi4527g00064 485 FunFam Mitotic cyclin 6 237 337 - -
Gabi4527g00064 485 PANTHER CYCLINS 179 467 IPR039361 -
Gabi4527g00064 485 MobiDBLite consensus disorder prediction 168 189 - -
Gabi4527g00064 485 PIRSF Cyclin_A_B_D_E 33 484 IPR046965 GO:0016538|GO:0044772
Gabi4527g00064 485 ProSitePatterns Cyclins signature. 254 285 IPR006671 -
Gabi4527g00064 485 Gene3D - 237 350 - -
Gabi4527g00064 485 Pfam Cyclin, N-terminal domain 223 350 IPR006671 -
Gabi4527g00064 485 CDD CYCLIN_AtCycA_like_rpt1 213 348 - -
Gabi4527g00064 485 FunFam Cyclin A1 339 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00064 Gabi-Chr4527 561364 565852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00064 9 481 Core Cell Cycle Gene Families AT5G25380 52.321 3.28e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00064 K06627 - gmx:547780 704.131