Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00057 ATGGGTGTGGATTACTACAATATATTGAAGGTTGACAGAAATGCTACGGAGGATGATTTGAAGAAAGCATATAGAAAGTTGGCCATGAAATGGCATCCTGACAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAAGTTCAAGCAGATCTCTGAGGCCTATGAGGTATTGAGCGATCCTCAGAAAAAGGTGATTTATGATCAGGATGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGGTAATGAACCATCAAGTGGGTTTAATCCCAGAAATGCAGAGGACATTTTTGCAGAATTCTTTGCAAGTAGCCCTTTTGGATTTGGATTATCTGGACCAGGGAAGTCCAAGAGATTCCAATCTGATGGAGGGGGAACATTTGGTGGATTTAAAACAGAGATATTAACCATTGATATAAAGCCCGGATGGAAGAAAGGGACAAAGATTACTTTCCCAGATAAAGGGAATCAGCAACCAAATCAACTGCCAGCAGACCTTGTATTTGTGATTGATGAGAAGCCTCATGATTTCTTCAAGAGAGATGGCAACGACCTCATTATGAACCAAAGGGTGTCACTAGCTGAAGCTATTGGAGGAACTTCAATAAATCTCACAACACTTGATAGACGTAGTTTATGTATCTCAGTGACTGACATTGTGAGCCCTGGTTATGAGTTTGTTGTTGCAAATGAAGGAATGCCAAAAACAAAGGAACCTGGTCATAGGGGGGATTTGAGGATCAAATTTGAGGTTAAGTTCCCTACAAAACTGACCACAGAGCAACGAGCAGGACTCAAGCGAGCATTGGGAGGTTGA 816 0.4228 MGVDYYNILKVDRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYEVLSDPQKKVIYDQDGEEGLKDRPPPGNEPSSGFNPRNAEDIFAEFFASSPFGFGLSGPGKSKRFQSDGGGTFGGFKTEILTIDIKPGWKKGTKITFPDKGNQQPNQLPADLVFVIDEKPHDFFKRDGNDLIMNQRVSLAEAIGGTSINLTTLDRRSLCISVTDIVSPGYEFVVANEGMPKTKEPGHRGDLRIKFEVKFPTKLTTEQRAGLKRALGG 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00057 271 Gene3D DnaJ domain 3 109 IPR036869 -
Gabi4527g00057 271 Pfam DnaJ C terminal domain 130 254 IPR002939 -
Gabi4527g00057 271 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gabi4527g00057 271 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gabi4527g00057 271 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 131 269 - -
Gabi4527g00057 271 CDD DnaJ 4 59 IPR001623 -
Gabi4527g00057 271 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi4527g00057 271 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi4527g00057 271 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi4527g00057 271 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gabi4527g00057 271 SMART dnaj_3 3 62 IPR001623 -
Gabi4527g00057 271 FunFam Dnaj homolog subfamily b member 115 173 - -
Gabi4527g00057 271 MobiDBLite consensus disorder prediction 62 78 - -
Gabi4527g00057 271 SUPERFAMILY HSP40/DnaJ peptide-binding domain 130 176 IPR008971 GO:0006457|GO:0051082
Gabi4527g00057 271 CDD DnaJ_C 133 257 - -
Gabi4527g00057 271 Gene3D - 111 173 - -
Gabi4527g00057 271 SUPERFAMILY Chaperone J-domain 3 110 IPR036869 -
Gabi4527g00057 271 Gene3D - 174 270 - -
Gabi4527g00057 271 FunFam DNAJ heat shock family protein 174 269 - -
Gabi4527g00057 271 SUPERFAMILY HSP40/DnaJ peptide-binding domain 177 263 IPR008971 GO:0006457|GO:0051082
Gabi4527g00057 271 MobiDBLite consensus disorder prediction 61 90 - -
Gabi4527g00057 271 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00057 Gabi-Chr4527 534275 536492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00057 5 67 C2H2 Transcription Factor Family AT1G74250 37.313 8.92e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00057 K09510 - mnt:21408834 421.394