Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00055 ATGGGTGTGGATTACTACAATATATTGAAGGTTGACAGAAATGCTACGGAGGATGATTTGAAGAAAGCATATAGAAAGTTGGCCATGAAATGGCATCCTGACAAGAACCCCACCAACAAAAAAGAAGCTGAAGCCAAGTTCAAGCAGATCTCTGAGGCCTATGAGAAAATATTGTCAATTCAGGTATTGAGCGATCCTCAGAAAAAGGTGATTTATGATCAGGATGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGGTAATGAACCATCAAGTGGGTTTAATCCCAGAAATGCAGAGGACATTTTTGCAGAATTCTTTGCAAGTAGCCCTTTTGGATTTGGATTATCTGGACCAGGGAAGTCCAAGAGATTCCAATCTGATGGAGGGGGAACATTTGGTGGATTTAGTGGAAGTGACAATAATTTTAGAACATACAGTGAAAGGGGGAACATGCCAAAGAAGCCAACACCTGTGGAAAGCAAATTGCCTTGCAGTTTGGAAGAGTTATACTCTGGATCTACAAGGAAAATGAAGATCTCAAGAACTGTGATGGATGCCAATGGACGGCCAATTCCAGAAACAGAGATATTAACCATTGATATAAAGCCCGGATGGAAGAAAGGGACAAAGATTACTTTCCCAGATAAAGGGAATCAGCAACCAAATCAACTGCCAGCAGACCTTGTATTTGTGATTGATGAGAAGCCTCATGATTTCTTCAAGAGAGATGGCAACGACCTCATTATGAACCAAAGGGTGTCACTAGCTGAAGCTATTGGAGGAACTTCAATAAATCTCACAACACTTGATAGACGTAGTTTATGTATCTCAGTGACTGACATTGTGAGCCCTGGTTATGAGTTTGTTGTTGCAAATGAAGGAATGCCAAAAACAAAGGAACCTGGTCATAGGGGGGATTTGAGGATCAAATTTGAGGTTAAGTTCCCTACAAAACTGACCACAGAGCAACGAGCAGGACTCAAGCGAGCATTGGGAGGTTGA 1005 0.4199 MGVDYYNILKVDRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYEKILSIQVLSDPQKKVIYDQDGEEGLKDRPPPGNEPSSGFNPRNAEDIFAEFFASSPFGFGLSGPGKSKRFQSDGGGTFGGFSGSDNNFRTYSERGNMPKKPTPVESKLPCSLEELYSGSTRKMKISRTVMDANGRPIPETEILTIDIKPGWKKGTKITFPDKGNQQPNQLPADLVFVIDEKPHDFFKRDGNDLIMNQRVSLAEAIGGTSINLTTLDRRSLCISVTDIVSPGYEFVVANEGMPKTKEPGHRGDLRIKFEVKFPTKLTTEQRAGLKRALGG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00055 334 Gene3D - 237 333 - -
Gabi4527g00055 334 FunFam Dnaj homolog subfamily b member 155 236 - -
Gabi4527g00055 334 Gene3D - 158 236 - -
Gabi4527g00055 334 SUPERFAMILY Chaperone J-domain 3 116 IPR036869 -
Gabi4527g00055 334 MobiDBLite consensus disorder prediction 75 96 - -
Gabi4527g00055 334 CDD DnaJ 4 65 IPR001623 -
Gabi4527g00055 334 ProSiteProfiles dnaJ domain profile. 4 76 IPR001623 -
Gabi4527g00055 334 FunFam DnaJ subfamily B member 13 238 318 - -
Gabi4527g00055 334 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi4527g00055 334 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi4527g00055 334 PRINTS DnaJ domain signature 68 87 IPR001623 -
Gabi4527g00055 334 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi4527g00055 334 SMART dnaj_3 3 68 IPR001623 -
Gabi4527g00055 334 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 332 - -
Gabi4527g00055 334 Pfam DnaJ C terminal domain 159 317 IPR002939 -
Gabi4527g00055 334 SUPERFAMILY HSP40/DnaJ peptide-binding domain 240 326 IPR008971 GO:0006457|GO:0051082
Gabi4527g00055 334 Pfam DnaJ domain 4 73 IPR001623 -
Gabi4527g00055 334 Gene3D DnaJ domain 3 115 IPR036869 -
Gabi4527g00055 334 CDD DnaJ_C 159 320 - -
Gabi4527g00055 334 SUPERFAMILY HSP40/DnaJ peptide-binding domain 159 239 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00055 Gabi-Chr4527 534275 536492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00055 5 73 C2H2 Transcription Factor Family AT1G74250 34.247 2.04e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00055 K09510 - gmx:100796426 538.88