Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4527g00034 ATGGCTTCAAGTTCTCTCTCTCTGTCCTTTCCCTGCTTCAAACTCAAGTTTTGGTTGACTTTTATTACATGTCTTATTGGTTTAACTTCAGCTCAGTTATCCACTAAATTCTATGATAAAAAGTGCCCAAAAGCCCTTCGCATCATTAATAAAGCAGTGGGAGATGCTGTGAACAAAGAGCGTCGCATGGGGGCATCCTTGCTTCGACTCCATTTCCATGACTGCTTTGTTCAAGGATGTGATGGATCAGTGTTGTTAGATGACACAGCAAATTTCACTGGGGAGAAAAGTTCTTTTCCAAACCGTAACTCCCTTAGGGGTTTTGAGGTCATAGACAACATCAAATCTCAATTGGAGAGTTCGTGCCCCGGTGTTGTCTCTTGTGCTGACATCGTAGCCGTTGCTGCCAGAGACTCTGTTGCTGCTCTTGGTGGACAAAGATGGGATGTACAATTAGGCAGAAAAGATTCAACCACAGCAAGTTTAGATGAATCTAATTCAGACTTACCTGCTCCCTTTTTGGATCTTAGTGGCCTTATCACTGCTTTCGCCAAGAAAAATTTCACAACCAAAGAAATGGTTACTTTATCAGGAGCTCACACAATAGGCCTAGTGAGGTGCAGTCTATTCAGAGCAAGGGTTTATAACGAGACAAATATAGATCCCTCATTTGCAGCATCAATGCAAGCAAAGTGTCCCTTCGAAGGTGGTGATGACAATTTATCTCCTTTCGATTCCACCACTCCATTCATTTTTGACAATGCTTACTACAAGAACTTGGTGAAGAAAAAGGGTCTCGTACACTCGGACCAACAACTCTTCGTGAATGGGTCAGGAGGACCCACAGACTCTGAAGTAGTTACATATAGCAGAAACATGGGACGTTTCAAAAAAGACTTTGCAGACGCAATGATAAAAATGAGCATGCTTAGACCTTTAACTGGCTCAGGCGGTGAGATCAGGAAAAACTGCAGGGTGGTTAATTAA 987 0.4265 MASSSLSLSFPCFKLKFWLTFITCLIGLTSAQLSTKFYDKKCPKALRIINKAVGDAVNKERRMGASLLRLHFHDCFVQGCDGSVLLDDTANFTGEKSSFPNRNSLRGFEVIDNIKSQLESSCPGVVSCADIVAVAARDSVAALGGQRWDVQLGRKDSTTASLDESNSDLPAPFLDLSGLITAFAKKNFTTKEMVTLSGAHTIGLVRCSLFRARVYNETNIDPSFAASMQAKCPFEGGDDNLSPFDSTTPFIFDNAYYKNLVKKKGLVHSDQQLFVNGSGGPTDSEVVTYSRNMGRFKKDFADAMIKMSMLRPLTGSGGEIRKNCRVVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4527g00034 328 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PANTHER PEROXIDASE 72-RELATED 28 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 FunFam Peroxidase 36 174 - -
Gabi4527g00034 328 ProSiteProfiles Plant heme peroxidase family profile. 32 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Gabi4527g00034 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4527g00034 328 Gene3D Peroxidase, domain 2 170 307 - -
Gabi4527g00034 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Gabi4527g00034 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Gabi4527g00034 328 FunFam Peroxidase 170 307 - -
Gabi4527g00034 328 Gene3D - 36 325 - -
Gabi4527g00034 328 Pfam Peroxidase 51 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4527g00034 Gabi-Chr4527 286269 288870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4527g00034 28 328 Peroxidase AT5G05340 58.746 5.36e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4527g00034 K00430 - gmx:100802244 520.776