Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4524g00001 ATGGTTGATCAGGTTCAGCACCCTAGAATCATGGAGAAGGTTGCAGGCCAGCTCCATCTCCGTTCTGGTGTTTCCTTGTACCACAGGCGCTCATTTGGGAATTACTCGAATGCTGCATTGCAGTATCCAGTGATGCCAGCATGCAGAGCTACAACTGATTTTTCTACTGTTGCAACAACAGGCTCTCCTATCTTTGTTGCAGCTCCTGCAGAGAAAGGAAACTTTATGGTTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTATCTAAAACTGCTGCTGCTCCCATTGAACGAATTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGTATTGGTGATTGTTTCAAGCGAACAATGCAGGATGAGGGTGTTGTTGCCTTATGGAGGGGCAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAAGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAAGGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTGCATTTGTTTACTCCCTTGACTATGCCCGTACCCGTCTGGCTAATGATTCAAAGGCTGCTAAGAAGGGTGGAGAAAGGCAATTCAATGGTCTTGTTGATGTTTACAAGAAGACATTGGCATCTGATGGTATTGCTGGTCTTTACCGTGGTTTCAACATTTCCTGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTCGGAATGTATGATTCCCTGAAGCCAGTTCTCCTGACTGGATCTTTGCAGGATAGCTTTTTTGCTAGCTTTGGTCTTGGGTGGCTCATTACCAATGGTGCAGGTTTAGCATCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACCTCTGGTGAAGCCGTCAAGTACAAGAGCTCCATGGATGCATTTGCACAAATCCTCAAGAACGAGGGTGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTACAGGTGATAATGTTGGGGAAGAAGTACGGTTCCGGTGGTGCTTAG 1128 0.4601 MVDQVQHPRIMEKVAGQLHLRSGVSLYHRRSFGNYSNAALQYPVMPACRATTDFSTVATTGSPIFVAAPAEKGNFMVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQDEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLAFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4524g00001 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 178 270 IPR018108 -
Gabi4524g00001 375 FunFam ADP,ATP carrier protein, mitochondrial 76 371 - -
Gabi4524g00001 375 PRINTS Adenine nucleotide translocator signature 152 164 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4524g00001 375 PRINTS Adenine nucleotide translocator signature 283 299 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4524g00001 375 PRINTS Adenine nucleotide translocator signature 75 87 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4524g00001 375 PRINTS Adenine nucleotide translocator signature 119 140 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4524g00001 375 PRINTS Adenine nucleotide translocator signature 178 191 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi4524g00001 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 364 IPR018108 -
Gabi4524g00001 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 166 IPR018108 -
Gabi4524g00001 375 Pfam Mitochondrial carrier protein 279 365 IPR018108 -
Gabi4524g00001 375 Pfam Mitochondrial carrier protein 177 273 IPR018108 -
Gabi4524g00001 375 Pfam Mitochondrial carrier protein 74 170 IPR018108 -
Gabi4524g00001 375 Gene3D Mitochondrial carrier domain 76 371 IPR023395 -
Gabi4524g00001 375 SUPERFAMILY Mitochondrial carrier 73 360 IPR023395 -
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 91 105 IPR002067 GO:0055085
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 78 91 IPR002067 GO:0055085
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 243 261 IPR002067 GO:0055085
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 141 161 IPR002067 GO:0055085
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Gabi4524g00001 375 PRINTS Mitochondrial carrier protein signature 287 309 IPR002067 GO:0055085
Gabi4524g00001 375 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 68 374 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4524g00001 Gabi-Chr4524 18371 21680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4524g00001 1 375 Antiporters AT5G13490 80.153 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4524g00001 K05863 - gmx:100819556 664.84