Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4517g00001 AATCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAGGGATATGCGAAAATAGATAAGCGAAAAGTTCCTTTGACGGATAATAACATCATTGAGCAGGAATTAGGAAAGTTTGGCATTGTATGCACAGAAGACATGGTGCATCAAATTGATAATGTTGGTCCGCACTTTAAGGAAGTTGTCAAATTTATGTGGCCCTTTGAACTCAACAAGCCAGCTGATGGATTAAAAGGATCAAAAACACTATACAAGGATGGTGGAGACACAGGGAGCCGTGAGGATCTCATCAATGAACTAATCAATAGAATGAATTAA 318 0.3711 NPNLKSIKELIYKKGYAKIDKRKVPLTDNNIIEQELGKFGIVCTEDMVHQIDNVGPHFKEVVKFMWPFELNKPADGLKGSKTLYKDGGDTGSREDLINELINRMN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4517g00001 105 CDD Ribosomal_L7_archeal_euk 2 105 IPR035808 -
Gabi4517g00001 105 PANTHER 60S RIBOSOMAL PROTEIN L7 2 105 IPR039699 -
Gabi4517g00001 105 Gene3D - 41 105 IPR036919 -
Gabi4517g00001 105 SUPERFAMILY Ribosomal protein L30p/L7e 2 105 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4517g00001 Gabi-Chr4517 1159 1684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4517g00001 2 105 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 57.692 2.69e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4517g00001 K02937 - gmx:100500005 192.2