Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4511g00090 ATGGCGGACACCGACGGTGATGGCAATGGCGTCTTCTATCTTCACGGTGACCTTGACTTGAAAATCATCGAGGCTCGCAGGTTGCCTAACATGGACCTCGTCTCCGAGCGTTTCCGCCGTTGCATCACCGCCTGCGACACTATCAAATTCCACTCCTCCGACACCGAACCTTCCGCCTCCACGGACAGGAGCGGCCGCCGAACCCACCACCGCAGAAAGATTATCACCAGCGACCCGTACGTCACCGTTTCGGTGCCGCAGTCAACCGTGGCACGCACGCGCGTGCTCAAGAATGCGCAGAACCCTCGCTGGGACGAGCGCTTCAATATCCCCCTGGCGCACCCGGTCGATGATTTGGAATTCCGCGTCAAAGACGACGACATTTTCGGTGCCCAGACAATTGGCACTGTTAAGATTCCGGCACAGGATATTGCCGCTGGCAAGATGATTTCCGGCTGGTTCCCGGTAATTGGCCCCTCCGGTAAGCCGCCAAAGCCGGAAACCGCGCTACACATTGAGATGTTGTTCACATCGGTGAACGATAACCCGCTTTACCGGCTAGGCATTGCGGCGGATCCCGAACACAGGGGCGTGAGACACACGTATTTTCCGTTGAGGAAGGGAAGCTCGGTGAGGTTGTACCAAGATGCACATTGTCACGATGAGACAGTACCGGAGATTCAGCTCGATGGTGGAAAAGTTTATAGGCAGGAAAAGTGCTGGGAAGATATCTGTTATGCTATATCTGAGGCTCATCACATGGTGTATCTCGTGGGTTGGTCAATTTATCACAAGGTGAAGCTTGTTAGGGAGCCAACTAAGCCTTTGCCAAGAGGTGGAGATTTGACGCTTGGTGAGTTGCTTAAGTACAAGTCTGAAGAAGGGGTGAGAGTTTTGTTGCTTGTTTGGGATGATAAGACTTCACACGATAAGTTCTTCTTCAAGACGGCCGGTGTGATGCAGACTCATGATGAGGAAACGAGGAAGTTTTTTAAACATTCTTCTGTTATGTGTGTTCTAGCACCTCGCTACGCTAGCAGCAAGTTGAGCTTCTTGAAGCAACAGGCCAGTATTGTTATCACTGTTGTTGGAAACGTCTTCACACACCACCAAAAATGTGTTATTGTGGATACACAGGCTGCTGGAAATGACCGAAAGATAACTGCTTTTATAGGAGGTCTTGATCTATGCGATGGTCGCTATGACACACCTAAGCATCGACTTTTTCATGATCTTGACACTGTATTTTCTGGTGATTTCCACAATCCTACTTTTCCTTCTGGAACAAGGGCTCCTAGACAACCGTGGCATGATCTGCACTGCAGAATAGATGGACCTGCAGCATATGATGTTCTTTTGAATTTTGAGCAGCGATGGAGAAAAGCAACTAGGTGGAAAGAGTTTACAATTCTTTTCAAAAAATCTTCTCAGTGGCATGATGATTCTTTATTAAAAATCGAACGCATCTCATGGATATTAAGTCCTTCCCATCCTACCTCAAAGGCTAAAAATACAAATGTGCCAGGGGATGACCCTTTAGTATGGGTTTCTAATGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTTCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAAAATGTTGATGTAGCTTTGTCTAAGAATCTTATTTGTTCTAAAAATTTGGTAATAGACAAAAGCATTCAAACAGGATACATTCAAGCGATCAGATCTGCTCAGCACTTCATTTATATTGAAAACCAATACTTTATCGGATCATCATATGCATGGCCGTCTTATAAAGATGCAGGGGCTGATAATCTCATCCCAATGGAATTGGCGCTGAAAATTGCTAATAAAATCAGAGCTAAGGAAAGATTTGCTGTTTATGTTGTTTTACCAATGTGGCCAGAAGGTGATCCTAAATCTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGGCCAGACAATGCAAATGATGTATGATGTTGTTGCTAGAGAATTGAAATCAATGCAAATTACCGACGTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAAGACTTTGATGAAGAAACCTCAAGCTCCAATGGTGCACAGGTCTCTGGAGCATATAAATATCGCCGATTTATGATTTATGTGCATGCCAAGGGGATGATCGTTGATGATGAGTATGTTATAATTGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACTAAAGATACCGAGATAGCTATGGGTGCATATCAACCCCATCACACATGGTCTGCGAAGAAAAGACACCCACGTGGCCAGATTTATGGTTACAGAATGTCACTTTGGAGAGAGCATCTTGGCATGTTAGATGAAACTTTTGAGGAACCAGGGAGATTGGAGTGTGTGCGTAAAGTGAATGCAATTGCAGACAATAATTGGAGACTATACACTTCCGAAGATTTCTCACTGCTGCAGGGACATATTCTTAAGTATCCTATACAGGTAGATTCCGATGGGAAGGTTAGCTCCCTACCTGAATGTGAGAATTTCCCAGATGCTGGCGGTAAGATATTGGGGAGTCAGTCCACAGCAATTCCAGATATCCTAACAACATAG 2601 0.4548 MADTDGDGNGVFYLHGDLDLKIIEARRLPNMDLVSERFRRCITACDTIKFHSSDTEPSASTDRSGRRTHHRRKIITSDPYVTVSVPQSTVARTRVLKNAQNPRWDERFNIPLAHPVDDLEFRVKDDDIFGAQTIGTVKIPAQDIAAGKMISGWFPVIGPSGKPPKPETALHIEMLFTSVNDNPLYRLGIAADPEHRGVRHTYFPLRKGSSVRLYQDAHCHDETVPEIQLDGGKVYRQEKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPTKPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKFFFKTAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKLSFLKQQASIVITVVGNVFTHHQKCVIVDTQAAGNDRKITAFIGGLDLCDGRYDTPKHRLFHDLDTVFSGDFHNPTFPSGTRAPRQPWHDLHCRIDGPAAYDVLLNFEQRWRKATRWKEFTILFKKSSQWHDDSLLKIERISWILSPSHPTSKAKNTNVPGDDPLVWVSNEDDPENWHVQIFRSIDSGSLKGFPKNVDVALSKNLICSKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIANKIRAKERFAVYVVLPMWPEGDPKSGAMQEILFWQGQTMQMMYDVVARELKSMQITDVHPQDYLNFYCLGNREDFDEETSSSNGAQVSGAYKYRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHHTWSAKKRHPRGQIYGYRMSLWREHLGMLDETFEEPGRLECVRKVNAIADNNWRLYTSEDFSLLQGHILKYPIQVDSDGKVSSLPECENFPDAGGKILGSQSTAIPDILTT 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4511g00090 866 ProSiteProfiles C2 domain profile. 1 154 IPR000008 -
Gabi4511g00090 866 PANTHER PHOSPHOLIPASE D 11 856 IPR015679 -
Gabi4511g00090 866 Gene3D C2 domain 15 184 IPR035892 -
Gabi4511g00090 866 FunFam Phospholipase D delta 231 481 - -
Gabi4511g00090 866 Pfam Phospholipase D C terminal 785 855 IPR024632 -
Gabi4511g00090 866 Pfam PLD-like domain 570 748 IPR025202 -
Gabi4511g00090 866 Gene3D Endonuclease Chain A 230 486 - -
Gabi4511g00090 866 Gene3D Endonuclease Chain A 530 762 - -
Gabi4511g00090 866 MobiDBLite consensus disorder prediction 52 72 - -
Gabi4511g00090 866 CDD C2_plant_PLD 10 177 - -
Gabi4511g00090 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Gabi4511g00090 866 SUPERFAMILY Phospholipase D/nuclease 201 477 - -
Gabi4511g00090 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 711 738 IPR001736 GO:0003824
Gabi4511g00090 866 SMART C2_3c 17 153 IPR000008 -
Gabi4511g00090 866 Pfam Phospholipase D Active site motif 365 400 IPR001736 GO:0003824
Gabi4511g00090 866 SUPERFAMILY Phospholipase D/nuclease 563 788 - -
Gabi4511g00090 866 Pfam C2 domain 16 156 IPR000008 -
Gabi4511g00090 866 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 178 IPR035892 -
Gabi4511g00090 866 PIRSF PLD_plant 4 866 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gabi4511g00090 866 SMART pld_4 711 738 IPR001736 GO:0003824
Gabi4511g00090 866 SMART pld_4 365 400 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4511g00090 Gabi-Chr4511 793828 804561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4511g00090 11 702 Phospholipase D Gene Family (Wang group) AT4G35790 71.326 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4511g00090 K01115 - gmx:100814486 1516.9