Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4511g00082 ATGCATTCAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCGTTTAAGCAGGGAATTCACCCACCGCCTACATTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAAACAACTAAAAATAGCATTGAAGATGGGGGCAGTGCTATGGGTGTGCCACCATATTTTCACGGGCCTATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCAGTACTTGGTGAGATCGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACAGATGGGTTTTCTCTGGATGTCTTTGTCGTTGTGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAAGTGTGTTGGAAAGGGAAATTTTGAAGGTTGAGGAGCAATATCTGTCAAATCAGGGCATACTTTATGCTACCAATGAACAATACCAGGCAAGGATGGAACCCTCTCCTCATTGCATACAAATACCTTCTGATGGAGCTGATGTCTGGGAAATTGATACCGACCAACTGAAATATGAACACAAAGTTGGCTCTGGGTCATTCGGTGACTTGTACAGAGGTACATATTGCAGTCAGGATGTGGCCATCAAAGTTCTTAAGCCTGAGCGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATACGACACAAGAATGTTGTTCAGTTCATCGGTGCTTGTACTCGGCCACCAAATCTTTGTATTGTTACCGAGTTTATGTCTAGAGGAAGCGTATATGACTTTCTGCACAAACAAAAGGGTGTATTTAAGCTTCCGTCTTTACTAAAAGTAGCGATTGATGTTTCCAAGGGAATGAATTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTTATGGATGAAAATGAATTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAGTCTGGAGTGATGACTGCTGAAACTGGAACATATCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTTTGGGAGCTTTTAACTGGAGAACTGCCTTACTCTTACTTGACCCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGCTTACGGCCTACTATTCCCAAAAATACACATCCAAGACTTTCTGAACTGCTCCAACGGTGCTGGCAACAAGATCCAGTGGAGAGACCGGATTTCTCTGAAATAATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCGATGATGAAAAAACTGATCGACACAAAGATAAGTCACCCCACGGCTTTCTTTCAGCACTTAGGCGTGCCCATCACTGA 1383 0.4266 MHSDPSEKEDAQSSLNYSFKQGIHPPPTFGSSSNLEALALQTTKNSIEDGGSAMGVPPYFHGPMHEITFSTVDKPKLLSQLTSVLGEIGLNIQEAHAFSTTDGFSLDVFVVVGWPNEETEELKSVLEREILKVEEQYLSNQGILYATNEQYQARMEPSPHCIQIPSDGADVWEIDTDQLKYEHKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSVYDFLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPVERPDFSEIIEILQQIAKEVDDEKTDRHKDKSPHGFLSALRRAHH 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4511g00082 460 FunFam serine/threonine-protein kinase HT1 258 448 - -
Gabi4511g00082 460 ProSiteProfiles ACT domain profile. 66 146 IPR002912 -
Gabi4511g00082 460 FunFam Serine/threonine-protein kinase isoform 1 169 257 - -
Gabi4511g00082 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Gabi4511g00082 460 MobiDBLite consensus disorder prediction 435 460 - -
Gabi4511g00082 460 Pfam Protein tyrosine and serine/threonine kinase 179 428 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 CDD STKc_MAP3K-like 185 428 - -
Gabi4511g00082 460 SUPERFAMILY ACT-like 64 128 IPR045865 -
Gabi4511g00082 460 SUPERFAMILY Protein kinase-like (PK-like) 156 428 IPR011009 -
Gabi4511g00082 460 SMART serkin_6 179 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4511g00082 460 CDD ACT_TyrKc 64 131 - -
Gabi4511g00082 460 Gene3D Phosphorylase Kinase; domain 1 169 257 - -
Gabi4511g00082 460 ProSiteProfiles Protein kinase domain profile. 179 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4511g00082 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 89 436 - -
Gabi4511g00082 460 ProSitePatterns Protein kinases ATP-binding region signature. 185 206 IPR017441 GO:0005524
Gabi4511g00082 460 Coils Coil 116 136 - -
Gabi4511g00082 460 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 PRINTS Tyrosine kinase catalytic domain signature 253 266 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 PRINTS Tyrosine kinase catalytic domain signature 336 346 IPR001245 GO:0004672|GO:0006468
Gabi4511g00082 460 Gene3D Transferase(Phosphotransferase) domain 1 258 453 - -
Gabi4511g00082 460 MobiDBLite consensus disorder prediction 435 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4511g00082 Gabi-Chr4511 737318 758675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4511g00082 3 459 MAP Kinase Kinase Kinase AT4G35780 70.022 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gabi4511g00082 PK_Tyr_Ser-Thr 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4511g00082 - - gmx:100816767 851.277