Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4511g00037 | ATGCCGAAGGCTACCACTAACTCCAAACCCGCCGATAACCGGTTGAAGCGCAAGGGAGCTGGAACCGGGAGGAAGCAGTCGAAGAAAGCTGCGAAGGATCCAAACAAGCCGAAGAGGCCTCCAAGCGCTTTCTTCGTTTTCATGTCTGATTTCAGAGAGCAGTTCAAGAAAGAGAATCCAGAGAACAAATCTGTCGCTGTCGTCGGTAAAGCTGGAGGTGGTAAATGGAAATCGCTGTCTGATGCGGAAAAGGCTCCTTACGTTGCTAAGGCAGGCAAGAAGAAAGCGGAGTATGAAAAGACTCTTCGGGCCTACAATACTGCATTGGCTGAGGGCAAAAACCGTTCAGAGGAAGAAGGGTCTGATAAGTCAAAGTCCGAAATCCATGATGAGGACGAAGAGGATGATGAAGAGGATGACGAGTAA | 426 | 0.493 | MPKATTNSKPADNRLKRKGAGTGRKQSKKAAKDPNKPKRPPSAFFVFMSDFREQFKKENPENKSVAVVGKAGGGKWKSLSDAEKAPYVAKAGKKKAEYEKTLRAYNTALAEGKNRSEEEGSDKSKSEIHDEDEEDDEEDDE | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4511g00037 | 141 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 37 | 106 | IPR009071 | - | |
Gabi4511g00037 | 141 | SMART | hmgende2 | 36 | 107 | IPR009071 | - | |
Gabi4511g00037 | 141 | Coils | Coil | 95 | 115 | - | - | |
Gabi4511g00037 | 141 | Gene3D | High mobility group box domain | 21 | 124 | IPR036910 | - | |
Gabi4511g00037 | 141 | SUPERFAMILY | HMG-box | 24 | 106 | IPR036910 | - | |
Gabi4511g00037 | 141 | Pfam | HMG (high mobility group) box | 37 | 106 | IPR009071 | - | |
Gabi4511g00037 | 141 | CDD | HMG-box_AtHMGB1-like | 38 | 98 | - | - | |
Gabi4511g00037 | 141 | MobiDBLite | consensus disorder prediction | 108 | 141 | - | - | |
Gabi4511g00037 | 141 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Gabi4511g00037 | 141 | MobiDBLite | consensus disorder prediction | 112 | 128 | - | - | |
Gabi4511g00037 | 141 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 4-RELATED | 6 | 139 | IPR031061 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4511g00037 | Gabi-Chr4511 | 330930 | 332112 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | HMG | Gabi4511g00037 | HMG_box | 1.3e-23 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4511g00037 | K25507 | - | gmx:100499992 | 187.963 |