Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4511g00032 ATGGGAGGCTTATTACACATTTTTGAGTTCAATCAGGGGAGGATGGCCAAGAAAGTCCATGCTCGTAAGAAACATCATGGTGGCCTGGAAGCTCCTCGGAATAGTCTAGATCTGCAAGTAGAAACATCTCAAAACTACTGTCCACAAGGAGAATCACCGTACTATTATAAAATAGAAGAAGACTGGTCTAAGAATAGTCGGCATTCAAACGTGGGTTCAATGAAAAAACTAATCAACGAGGAGCTATCCAAACGATCAAGCACCAGACAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCATCAGACACTAAATATGTTGTTTCATCAGATAAAAGAGTAAGTGAAAACATGGGGAAGATGTTTTCAAACAAGGGAATGAATGAAAGGGGTTCTTCCAAATTTAATTCTTCTAGCCAGATGGAATTGGATTCATTTTATCATGACATAGATGATGATGATGGATGGACCCAGAGTTTTGGAGAACCAAGGCCACGGGAACATCCTCAGGAAGAGGAACTGCAAAAATTCAAGAAAGAGTTCGAAGCATATCAAGCAGCAAGGTTTCTAGAGTGTTCAAAGTTTGCTGAAATTGGCAGTGTTTCTAGACAAGTGCTAGCTCAAGAGAACCTGAACAAGGAAAAGGTGACACATAATGCAAGTGTACAAAGAGAAGCAACAGAGAAACTTGCAGAGCTTGCCAACCACTCATTCAAAGCAGAGATACCTGACATTGGCAGTTCAGAATATCGTGGTGATACATTGGGGTTAATCCCTGCTAGGCAAAGGAAAACCTTTCCTTCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTAATGTTTAAATCTCGTAACAGATTAGACACGTCTCCTTCTCCAACTCGGATAGTTATCTTGAAGCCTGGTCCAGATAGCTCTTGCAACCTTGAAGAGAATTGGACCAGTTCATCAAGCACTTTACAAGGGAGAAATAGTATAGAAGATTTTCTTGAGGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAACTGTCAAAAAAGGTTCTGTGGTCCGAGGAAGTGAAATTGAGGCACCTTACAATGAAAAACCATCTGTAAGGTCAGAATCAACAAGTTCATACAAAAGTGAAATGCAGTTCAATGAACCAAGTTCCCCAGAATTTATCAGTAGAGATACCAGGAAGTTCTTATCAGAGAGGCTGAGAAATGTTGTGAAAAGGGAAACACATCTTGACATTCCGGGGGGGAACTCAAGGTCACATGCATTAGATAATCACAGAGTTCGACTAAAGCAAACATGGGATAATATGAAGTGTGAAAATGACATGAACCACTGGGAAATTTCAAAAGAGGAAACACAAACAGGATCTTTCAGGCACGAACCAGATGACAATTTATTGCTCCACAAGGAGTTGTCCCCAAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAGGATCGGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGTCACGTATTAACTGGTGCCCATATTCGGAGGAAGCTTGAAGCTGTTGAAACCATGTCTGTTGATGATAAAAAGCGGAAAAAAAATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAGTCTTGCTCTGAGAGGGAAGCTTTTTGGTAAAAGGGTTCAATCAATGGTAGAATCACATGGCAATGAATATGATCCAATGGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTATGGTGATAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCGGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAATATCAACTCCAGATGTATCTTCAAGAGATGATAATGTTGTGCCCCAGGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAGGAGGCAACTCAGTCGACTTGAATCTGATGGTGCTGAGGACTTCACTGCGAAACATGAGCCCATTGATTCAGAATTAATTCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATTTACTTGTTGCTTCAGGACTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCAAAAGAAATTGGTCAAGGAGAATGATGAAAGTTATATAAAGGATCAGAATGAGAATAAGCTAGACCATAAGGTTTTACATGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGACGTTTTCAAGATTCAGAAGGAAATTAAGCAACTCTTGCATGTTGCCACCACCTTGCGGAAAGGAACTGCTGAACTTAGTATGGGACATTATCCGTGTTTCTTTATATCCTCCATCTGACATGTTTCCTTATTCACTTGAGAGTTTGGTGGCTCAACACCTGAGATCCATACCCTGGTCCGGATTAATAAACGATGAGATCAATATATTGGAGAGAGAGATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGCTCTGA 2586 0.4053 MGGLLHIFEFNQGRMAKKVHARKKHHGGLEAPRNSLDLQVETSQNYCPQGESPYYYKIEEDWSKNSRHSNVGSMKKLINEELSKRSSTRQNAPSIVARLMGIDMMPSDTKYVVSSDKRVSENMGKMFSNKGMNERGSSKFNSSSQMELDSFYHDIDDDDGWTQSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKFAEIGSVSRQVLAQENLNKEKVTHNASVQREATEKLAELANHSFKAEIPDIGSSEYRGDTLGLIPARQRKTFPSRSRTLSRDFEESLMFKSRNRLDTSPSPTRIVILKPGPDSSCNLEENWTSSSSTLQGRNSIEDFLEEVKERLKCELQGKTVKKGSVVRGSEIEAPYNEKPSVRSESTSSYKSEMQFNEPSSPEFISRDTRKFLSERLRNVVKRETHLDIPGGNSRSHALDNHRVRLKQTWDNMKCENDMNHWEISKEETQTGSFRHEPDDNLLLHKELSPRNLVRSLSAPVSGSGTSFGKLLLEDRHVLTGAHIRRKLEAVETMSVDDKKRKKNRFNIKERVSNFRYSLALRGKLFGKRVQSMVESHGNEYDPMVRDVTSGPTVLMNYGDRHENSTEVPPSPASVCSSVHEDFWRRTEYLSPISTPDVSSRDDNVVPQVFRDISSGLNELRRQLSRLESDGAEDFTAKHEPIDSELIQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESQKKLVKENDESYIKDQNENKLDHKVLHDLLNEALSVVLGPPLTFSRFRRKLSNSCMLPPPCGKELLNLVWDIIRVSLYPPSDMFPYSLESLVAQHLRSIPWSGLINDEINILEREIECLITDDLVEELTKDML 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4511g00032 861 Coils Coil 642 662 - -
Gabi4511g00032 861 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 860 - -
Gabi4511g00032 861 MobiDBLite consensus disorder prediction 369 395 - -
Gabi4511g00032 861 Pfam DUF761-associated sequence motif 90 108 IPR032795 -
Gabi4511g00032 861 MobiDBLite consensus disorder prediction 372 395 - -
Gabi4511g00032 861 Pfam Domain of unknown function (DUF4378) 687 855 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4511g00032 Gabi-Chr4511 281418 287515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4511g00032 74 860 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 43.103 2.57e-165 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4511g00032 - - gmx:100779720 1310.43