Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4511g00021 ATGGCACAAGGGACTAATTGCACGTCTCAAACAACTATATTGAGTGGTCGTTATGCCATGGAGGATCAGAATGGTGATACTGTGGGGAATTTAAATCAAAATATTGGGAAACCTCCAAGGGATCATTCGGTTATGCGCCATTGCAGCAGCTCTTCATGGTTGGCTGAATCGGAATCAAATATTGATATTATTGGCTTGAAATCAAGCACAGAAGAAAAATCTGAGTTTTCACCTATATTGCGGTCTGGAAGCAGCTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGCTGATACTCTTCATGAATGTGTTGGTCCAAAAGAGGACCTTCCTTCTCCAGCAGCATTGTATGGGGTATTCGATGGACATGGTGGTATTGATGCAGCATCATTCACCAGAAAGAACATCCTTAAGTTTATAATCGAAGATTCCAATTTTCCATCTGGCCTTAAGAAAGCTGTTAAGAGTGCATTTGTGAAGGCTGATCTTACATTAAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACCGCTCTAGTAGCCATTGTGTTGGGAAGGGCCATGCTAATTGCCAATGCTGGGGATTCTCGTGCTGTATTGAGCAAACGAGGAAGAGCCATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCCGAAAGATTAAGAATTGAGAAACTGGGTGGTGTGATCTATGATGGATACCTCAATGGCCAATTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATAAAAGGTTCAAAGGGGTCTAAAAGTCCCTTAAGCTCTGAGCCTGAGCTGGAGGAGATTGTGTTGACAGAAGAAGATGAGTTTTTTATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGTGCTGTTACAATGGTGAGGAGGGAACTCATGCAGCATAATGATCCCACAACATGTGCAAAGGCACTTGTTACTGAGGCCCTCCAACGCAACACATGTGACAATCTTACAGTTGTTGTGGTATGTTTCTCTAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCACATAGGAGGAGGAGTATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGGAGATGA 1128 0.4282 MAQGTNCTSQTTILSGRYAMEDQNGDTVGNLNQNIGKPPRDHSVMRHCSSSSWLAESESNIDIIGLKSSTEEKSEFSPILRSGSSSDKGPKQYMEDEFICADTLHECVGPKEDLPSPAALYGVFDGHGGIDAASFTRKNILKFIIEDSNFPSGLKKAVKSAFVKADLTLRDASALDSSSGTTALVAIVLGRAMLIANAGDSRAVLSKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFFIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKALVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNGR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4511g00021 375 Gene3D - 65 345 IPR036457 -
Gabi4511g00021 375 SUPERFAMILY PP2C-like 74 342 IPR036457 -
Gabi4511g00021 375 FunFam Probable protein phosphatase 2C 22 66 344 - -
Gabi4511g00021 375 Pfam Protein phosphatase 2C 83 333 IPR001932 -
Gabi4511g00021 375 ProSiteProfiles PPM-type phosphatase domain profile. 81 341 IPR001932 -
Gabi4511g00021 375 SMART PP2C_4 71 339 IPR001932 -
Gabi4511g00021 375 PANTHER PROTEIN PHOSPHATASE 2C 68 339 IPR015655 GO:0004722|GO:0006470
Gabi4511g00021 375 CDD PP2Cc 81 341 IPR001932 -
Gabi4511g00021 375 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4511g00021 Gabi-Chr4511 196203 200307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4511g00021 64 373 PP2C-type Phosphatase Gene Family AT3G51470 77.097 2.58e-177 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4511g00021 K14803 - gmx:100786416 605.134