Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4511g00020 ATGGCACAAGGGACTAATTGCACGTCTCAAACAACTATATTGAGTGGTCGTTATGCCATGGAGGATCAGAATGGTGATACTGTGGGGAATTTAAATCAAAATATTGGGAAACCTCCAAGGGATCATTCGGTTATGCGCCATTGCAGCAGCTCTTCATGGTTGGCTGAATCGGTTAGTATAATGAAATCCCATGTTGAATCAAATATTGATATTATTGGCTTGAAATCAAGCACAGAAGAAAAATCTGAGTTTTCACCTATATTGCGGTCTGGAAGCAGCTCTGATAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATATGTGCTGATACTCTTCATGAATGTGTTGGTCCAAAAGAGGACCTTCCTTCTCCAGCAGCATTGTATGGGGTATTCGATGGACATGGTGGTATTGATGCAGCATCATTCACCAGAAAGAACATCCTTAAGTTTATAATCGAAGATTCCAATTTTCCATCTGGCCTTAAGAAAGCTGTTAAGAGTGCATTTGTGAAGGCTGATCTTACATTAAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACCGCTCTAGTAGCCATTGTGTTGGGAAGGGCCATGCTAATTGCCAATGCTGGGGATTCTCGTGCTGTATTGAGCAAACGAGGAAGAGCCATTGAACTTTCTAAAGACCATAAACCAAATTGCACTTCCGAAAGATTAAGAATTGAGAAACTGGGTGGTGTGATCTATGATGGATACCTCAATGGCCAATTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATAAAAGGTTCAAAGGGGTCTAAAAGTCCCTTAAGCTCTGAGCCTGAGCTGGAGGAGATTGTGTTGACAGAAGAAGATGAGTTTTTTATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGTGCTGTTACAATGGTGAGGAGGGAACTCATGCAGCATAATGATCCCACAACATGTGCAAAGGCACTTGTTACTGAGGCCCTCCAACGCAACACATGTGACAATCTTACAGTTGTTGTGGTATGTTTCTCTAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCACATAGGAGGAGGAGTATTTCAGCTGAAGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGGAGATGA 1152 0.4253 MAQGTNCTSQTTILSGRYAMEDQNGDTVGNLNQNIGKPPRDHSVMRHCSSSSWLAESVSIMKSHVESNIDIIGLKSSTEEKSEFSPILRSGSSSDKGPKQYMEDEFICADTLHECVGPKEDLPSPAALYGVFDGHGGIDAASFTRKNILKFIIEDSNFPSGLKKAVKSAFVKADLTLRDASALDSSSGTTALVAIVLGRAMLIANAGDSRAVLSKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFFIMGCDGLWDVMSSQCAVTMVRRELMQHNDPTTCAKALVTEALQRNTCDNLTVVVVCFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNGR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4511g00020 383 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Gabi4511g00020 383 PANTHER PROTEIN PHOSPHATASE 2C 76 347 IPR015655 GO:0004722|GO:0006470
Gabi4511g00020 383 ProSiteProfiles PPM-type phosphatase domain profile. 89 349 IPR001932 -
Gabi4511g00020 383 FunFam Probable protein phosphatase 2C 22 74 352 - -
Gabi4511g00020 383 SMART PP2C_4 79 347 IPR001932 -
Gabi4511g00020 383 SUPERFAMILY PP2C-like 82 350 IPR036457 -
Gabi4511g00020 383 Pfam Protein phosphatase 2C 91 341 IPR001932 -
Gabi4511g00020 383 CDD PP2Cc 89 349 IPR001932 -
Gabi4511g00020 383 Gene3D - 73 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4511g00020 Gabi-Chr4511 196203 200307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4511g00020 72 381 PP2C-type Phosphatase Gene Family AT3G51470 77.097 2.26e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4511g00020 K14803 - gmx:100786416 600.897